| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0749 |
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| Symbol | |
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| ID | 4016855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 870674 |
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| End bp | 872398 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954734 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_561762 |
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| Protein GI | 91792111 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0015193 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCCATT CTATAGTCCG TCGTCCAATG CTTGATATAA GCCATCTTCC TGCTGACATG
CATCCATTGC TTCAGCAAAT TTTTGCTAAA CGTGGTGCGG CCTTTGATGA CTGTACACTG
GCATTAAATC AGCTTTTGCA CCCCAAGAGC ATGAAAGGAT TAGCCGCAGC GGCGAGCATA
GTGGCCGATG CAATCATGGA CAATAAGTCG ATTTTAATTG TCGGTGACTT TGATGCCGAT
GGCGCGACGT CAACCTGTGT GTGTATGTTG GCGCTGCGGA TGATGGGGGC TAAAAAAGTA
GATTATTTAA TCCCGAATCG ATTCGATTAC GGTTATGGGT TGAGCCCTGA AATTGTGGCT
TTGGCTTATC GTAAAGAGGC GCAATTATTG ATAACCGTCG ATAATGGCAT TTCTTCCATA
GAGGGGGTCG CCGCCGCTAA AGCCTTAGGC ATGCAGGTCG TGGTCACAGA CCATCATTTA
CCGGGCAAAA CTATTCCCGA TGCCGATGCC ATAGTCAATC CCAACCAAGC GGGCTGTGAA
TTTTCCAGTA AAGCCATCGC TGGGGTTGGG GTGGCATTCT ACTTGATGTC GGCGCTGCGC
CAAGAGTTAA GGTCAAGGGA TTGGTACCAG AATCAAGCGC TGCCTGAGCC AAATTTAGCC
GAGCTATTGG ACATCGTCGC CTTAGGAACC GTGGCGGACG TGGTGGCTTT TGATAGAAAT
AATCGCATCA TGGTGCAGGC AGGACTGCAA AGAGTCAGAA GCGGGCGTTG CCGAGTGGGG
ATCACAGCTT TGCTTGAAGT GGCAAAACGC ACGCCTGAGC GGATCGTTGC TGCCGACTTT
GGCTTTGCCG TTGGGCCAAG GCTCAATGCC GCTGGCCGTT TAGATGAAAT GGCATTAGGG
GTCGAAACCT TATTGTGTGA GGATATCAAC CTAGCCAGAC GCATGGCAGC ACAGCTTGAT
GGGTTAAATA CAGAGCGCCG TGAGCTTGAA GCTGACATGC AGCAAGAAGC CCTTAAAACC
TTAGCCTCCA TCACCCTAGA TGAAACTCAA TTGCCTTGGG GCATAGCGCT CTTTCAAGCC
GATTGGCACC AAGGGGTGAT AGGGATTTTA GCGTCGCGAA TTAAAGACAG ATATCACAGG
CCTGTGATCG CGTTTGCCGA TGCCGGTGAC GGGAGCATTA AAGGCTCGGC TCGCTCCATT
AAGGGCTTGC ATATGCGTGA CCTATTGGAG CAAATAAACA CTCAGCACCC CGGCATGATC
TTGAAATTTG GTGGTCATGC CATGGCAGCA GGCTTGACGT TGGCAGCGGA TCATTTTGAT
CAATTTGAAC TAGCCTTCGA TGAAGCCATT AGAGGTTTAT TGACCAAAGA ACAACTCACA
GGTGAAGTCT TGTCAGACGG TGAGCTTGCC ATCGAACATA TGTCCCTTGA AACGGCGATG
TTATTAAGAA ATGCAGGCCC CTGGGGGCAG CATTTCGAAG AGCCAGTGTT TGATGGGGTG
TTCACCTTAG TGCAACAGAG ATTAGTTGGT GAAAAACACC TTAAAATGCT GCTGGAAACT
CAGTGTGCCA GCTTAATGCT CGATGCTATT GCCTTTAATG TCGATTTGCA GGCTTGGCCA
GATGCCAGCG TGCGCCACGT AAGGGTCGCT TACAAGTTGG ATGTTAACGA ATTTCGTGGC
AAGCAAAACC TGCAGTTAAT GATCGAACAT TTAGAAGCCG TATAG
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| Protein sequence | MSHSIVRRPM LDISHLPADM HPLLQQIFAK RGAAFDDCTL ALNQLLHPKS MKGLAAAASI
VADAIMDNKS ILIVGDFDAD GATSTCVCML ALRMMGAKKV DYLIPNRFDY GYGLSPEIVA
LAYRKEAQLL ITVDNGISSI EGVAAAKALG MQVVVTDHHL PGKTIPDADA IVNPNQAGCE
FSSKAIAGVG VAFYLMSALR QELRSRDWYQ NQALPEPNLA ELLDIVALGT VADVVAFDRN
NRIMVQAGLQ RVRSGRCRVG ITALLEVAKR TPERIVAADF GFAVGPRLNA AGRLDEMALG
VETLLCEDIN LARRMAAQLD GLNTERRELE ADMQQEALKT LASITLDETQ LPWGIALFQA
DWHQGVIGIL ASRIKDRYHR PVIAFADAGD GSIKGSARSI KGLHMRDLLE QINTQHPGMI
LKFGGHAMAA GLTLAADHFD QFELAFDEAI RGLLTKEQLT GEVLSDGELA IEHMSLETAM
LLRNAGPWGQ HFEEPVFDGV FTLVQQRLVG EKHLKMLLET QCASLMLDAI AFNVDLQAWP
DASVRHVRVA YKLDVNEFRG KQNLQLMIEH LEAV
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