Gene Sden_0747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0747 
Symbol 
ID4016853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp868759 
End bp869670 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content49% 
IMG OID637954732 
Producttyrosine recombinase XerD 
Protein accessionYP_561760 
Protein GI91792109 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02225] tyrosine recombinase XerD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000635712 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTTGTGA ATAAGAGTTC AGTAACAGCC GACCCCATCA TTGATGTTTT CTTAGATGCA 
CTTTGGTCCT CAAAAGGCTT AAGCAATAAT ACGCTTGCCT CCTACGGCAC AGATTTACGC
CATTTTCAGC GCTACCTTGC AGCTCAACAA CTCAACTTAT TAGATGCCAG CCAAGAAACT
GTTCGCCAAT ACCTTGCTTG GCGGCAAGAG CAAGGTTTTG CTAAAAGCAG TAGCGCCAGA
CTGATGAGTA GCTTAAGGCG TTTCTACGCT TATTGGTTAT CGCTTAAACG CATTGCTATT
GATCCTTGTG CCAAATTGGC TTCACCTAAG CTGAGCCGGG GGCTGCCTGC GGCGCTAAGT
GAGGCCGAGG TCGATGCACT CTTGTCAGAG CCAGCAGCTG ATGACCCCAT AGAAATACGG
GATAAAGCCA TGCTTGAACT CTTATATGCC ACAGGCCTTA GGGTGACAGA ATTAGTGAGT
TTGACCATGG ATCAGATAAG CCTGCGCCAA GGTCTAGTGC GTATTACAGG TAAAGGTGGA
AAAGAGCGAC TAGTGCCACT TGGGGAATTG GCGGTGGCAG AAGTTGACAC TTACTTGAGT
TTAGCCCGCA GTGAGTTACT CAAAGGCAAG CAAAGTGAGG TGTTGTTTCC CTCCAAACGC
GGCACCATGA TGACGCGGCA AACCTTCTGG CATCGTATTA AGCATTATGC CCTGCGGGCG
AGTATTGCCA CTGAGCTTTC ACCCCACACC CTGCGTCATG CATTTGCGAC TCATCTTCTT
AACCATGGCG CAGATTTAAG GGTGGTACAG CTACTTTTAG GCCACAGTGA CTTGTCGACC
ACGCAAATTT ACACCCATGT GGCTAAGGCG CGCTTACAAG ACTTACACAG ACAACATCAC
CCTAGAGGTT AG
 
Protein sequence
MLVNKSSVTA DPIIDVFLDA LWSSKGLSNN TLASYGTDLR HFQRYLAAQQ LNLLDASQET 
VRQYLAWRQE QGFAKSSSAR LMSSLRRFYA YWLSLKRIAI DPCAKLASPK LSRGLPAALS
EAEVDALLSE PAADDPIEIR DKAMLELLYA TGLRVTELVS LTMDQISLRQ GLVRITGKGG
KERLVPLGEL AVAEVDTYLS LARSELLKGK QSEVLFPSKR GTMMTRQTFW HRIKHYALRA
SIATELSPHT LRHAFATHLL NHGADLRVVQ LLLGHSDLST TQIYTHVAKA RLQDLHRQHH
PRG