| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0712 |
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| Symbol | |
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| ID | 4016913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 821895 |
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| End bp | 823520 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954697 |
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| Product | chemotaxis sensory transducer |
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| Protein accession | YP_561725 |
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| Protein GI | 91792074 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000566108 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTTC AACTTAAACA AAAAATGCTC TTAAGCTCCG TTGTCCCACT AGTTTTGCTT
ATCTGTATTT GCGTCATGGC CATCAGCATG ATGGGGAAAA TTGAGCAAGG AGTTGTGCGT
ATTTACAACG ACAGAGTCGT CCCCCTTGAA GACTTAAAGA TTATTGGCGA CGATTACGCC
GTCTATGTTA TCGATGCTAT CAATAAGGCC AACGCCGGTG ATTTTACGGC CCAAGAAGCT
AGCCAAGGCT TGGTCGATGC GAAGAAAAAC ATCACCACCC GTTGGAAAAA ATACATGCAA
ACCGAGCTTA CCGTAGAGGA AGCCCGATTA GCTAACGAAG CTGATGCCAT GTTCGGCCCC
GCTGACATGC AAATCGATAA GCTTATTGCT AAGCTTAGAA CCATGTCTGG CAACGTATCC
GGACAGCTTA GCAGCGAGAT AGTGCCCTTA TATCAAGTGA TTGACCCCAT CAGCGGTAAA
ATCGCCGAAT TAGTATCATT ACAAATCCGT GTGGCGGGAG AAGAGAAGCA AGCCGTTAAT
GATGTTTACA CTACCTCCTC AAGCTTATTC ATCCTGATCG CCGCACTTTC CATTGCCGCA
AGTCTTGCCT TAAATATTTG GGTACGAAGA AGCGTCATGG CACCTGTTAA CGACATTTTA
TCTAAGCTAA AAATAATAAA GAAAGACTCT GATTTAACTC AAGTGTTCAC TATTTTTAAT
GATGATGAGC TAGGTCAAAT ATCCACTAAT TTAACCAGCG TGATAGAGCA TTTAAGGAGC
ATATTAGATT CAATTTCAAA TGCGGCCAAC ACCATTAACA CTTCAGCAAA CAGCCTAAAC
AGCTTCACCC GTGAAACCAA TGACCGCATG CATCAACAAC AGGCCGAAAC TGAGCAAACC
GCCGCCGCCA TGAATGAAAT GACGGCCACA GTGGCGGAAG TCGCCCAAAG TACAACAGCT
GCGGCGGATT CCGCCAGAAA TGCGGATTCC CATGCCGCCA ATGGCGATAT CATAGTGCAA
CAATCCATCA AGAGTATGTC GCTACTGTCG ACTCAAATTC AACAAACCGC CGAGGTGATT
TCACATTTAT CTAATGAAAG CCAAAATATC GGCCAAGTGT TAGACGTCAT TAAAAGCATT
GCTGAGCAGA CCAACCTACT GGCGCTGAAT GCCGCCATTG AAGCGGCAAG AGCCGGCGAA
CAAGGCCGCG GCTTTGCCGT GGTCGCCGAT GAAGTGCGCA CCTTAGCTAA GCGCACTCAA
GAGTCGACTT TGCAAATTGA AACCATGATA GATGGTTTAC AGCAAGGGGT GAAAAAAGCG
GTTGCCTCAA TGCAAGTGGG GATATCTCAA GTAGATGAAG CCAATGAGAA AACCAATATG
GCAGGTAAAG CACTGAAAGA AATAGTCAGT TCTGTGGACA GTATTGCCGA ATTGAACACC
CATATAGCCA CGGCGGCAGA GGAGCAATCC AGTGTCGCGG AAAGCATTAA TCGCAGTATT
ATTGCCATCA GTGATATTAC TCAGCACTCA AGCCAAGCCG CCGGAGAGTT AAGTCACTCA
GTTAATGAGC TCTCTAAGCT GGCGACGTCT ATGCGCGATC AAGTGGGTAC CTTTAAACTG
CATTAG
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| Protein sequence | MNLQLKQKML LSSVVPLVLL ICICVMAISM MGKIEQGVVR IYNDRVVPLE DLKIIGDDYA
VYVIDAINKA NAGDFTAQEA SQGLVDAKKN ITTRWKKYMQ TELTVEEARL ANEADAMFGP
ADMQIDKLIA KLRTMSGNVS GQLSSEIVPL YQVIDPISGK IAELVSLQIR VAGEEKQAVN
DVYTTSSSLF ILIAALSIAA SLALNIWVRR SVMAPVNDIL SKLKIIKKDS DLTQVFTIFN
DDELGQISTN LTSVIEHLRS ILDSISNAAN TINTSANSLN SFTRETNDRM HQQQAETEQT
AAAMNEMTAT VAEVAQSTTA AADSARNADS HAANGDIIVQ QSIKSMSLLS TQIQQTAEVI
SHLSNESQNI GQVLDVIKSI AEQTNLLALN AAIEAARAGE QGRGFAVVAD EVRTLAKRTQ
ESTLQIETMI DGLQQGVKKA VASMQVGISQ VDEANEKTNM AGKALKEIVS SVDSIAELNT
HIATAAEEQS SVAESINRSI IAISDITQHS SQAAGELSHS VNELSKLATS MRDQVGTFKL
H
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