Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0649 |
Symbol | |
ID | 4016678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 749784 |
End bp | 751154 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637954634 |
Product | amino acid carrier protein |
Protein accession | YP_561662 |
Protein GI | 91792011 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCCA TTACAGAATT TATAAGTACA ATCAATGGCA TAGTTTGGGG TGTTCCCATG CTGGTAATGA TCTTAGGGGT GGGGCTATTC TTGTCCATCG GCCTTAGGTT AATGCCCATC TTAAAATTAG GTCGCGGTTT CAAGTTGTTA TGGTCTGGCC GAGCAGTGTC AGAGGATGCC GATAAGGGCG AAATTAGCCC ATTTAATGCC TTGATGACCT CACTGTCTGC CACCATAGGC ACAGGTAATA TTGCCGGTGT GGCGACCGCC ATTTTTATCG GTGGCCCAGG CGCCTTGTTT TGGATGTGGT GTACTGCGCT TGTAGGCATG GCGACCAAGT ATTCTGAGGC CGTGCTCGCG GTTAAGTTTC GTGAGAAAGA CACAGAGGGT AACCATGTCG GTGGCCCCAT GTACTATATC AAAAATGGTT TAGGCAAAAA ATGGGCATGG CTTGGCACTG CTTTTGCGCT GTTTGGCTCA ATAGCTGGCT TTGGGATCGG CAATACAGTG CAAGCCAATT CTGTGGCTGA CGCCATGAGC AGCAATTTTG GTGTGCCCGC TTGGGTCACT GGAGCGGTGT TGATGCTGCT GGTTGGCGCC GTATTAATGG GCGGCATTAA ACGTATCGCC GAAGTGGCAG GCAAACTGGT GCCACTGATG ACAGTGTTTT ATATCACAGC AGGGCTTGCG GTATTAATCG TTTACGCAGA ACAAGTGCCA GATGCCTTTA TGTTGATTAT CCACAGTGCC TTTAATCCGG TGGCAGCCCA AGGCGGTTTC GCTGGGGCTG CGGTATGGGC GGCAATTCGC TTTGGTGTGG CTCGTGGGGT GTTTTCCAAT GAAGCGGGCC TAGGTAGCGC GCCCATTGCC CACGCGGCGG CGCAAACTAA CGATCCGGTC AAGCAAGGTT TAGTCGCCAT GCTGGGCACC TTTATCGACA CCCTTATTGT CTGCACCATT ACCGGTCTTG CCATTGTGGT TTCTGGGGCG TGGACATCGG GGGAGAATGG CGCAGCGTTA ACCTCCTTTG CCTTCTCTCA TGCATTGCCT ATGGGTAACT ACATAGTGGC CATTGCCTTG GCCGTATTTG CCTTTACCAC CATCTTAGGC TGGAGTTTTT ACAGCGAAAA GTGCGTCCAG TATCTCTTGG GAGACAAGGC CATTAAGCCG TTTCGATTAA TCTGGACCTT AGTGGTGCCA TTAGGGGCGA TGAGCTCCCT TGAGTTTATT TGGTTATTGG CAGATACCTT AAATGCCATG ATGGCCATCC CCAACTTAAC GGCCTTAGTA TTATTAAGCC CAGTCGTGTT TGGCTTAACT CGAGAATACT TTATAAAACA AAGGCAGCTC GCGGCCAATA AAGTCGATTG A
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Protein sequence | MEAITEFIST INGIVWGVPM LVMILGVGLF LSIGLRLMPI LKLGRGFKLL WSGRAVSEDA DKGEISPFNA LMTSLSATIG TGNIAGVATA IFIGGPGALF WMWCTALVGM ATKYSEAVLA VKFREKDTEG NHVGGPMYYI KNGLGKKWAW LGTAFALFGS IAGFGIGNTV QANSVADAMS SNFGVPAWVT GAVLMLLVGA VLMGGIKRIA EVAGKLVPLM TVFYITAGLA VLIVYAEQVP DAFMLIIHSA FNPVAAQGGF AGAAVWAAIR FGVARGVFSN EAGLGSAPIA HAAAQTNDPV KQGLVAMLGT FIDTLIVCTI TGLAIVVSGA WTSGENGAAL TSFAFSHALP MGNYIVAIAL AVFAFTTILG WSFYSEKCVQ YLLGDKAIKP FRLIWTLVVP LGAMSSLEFI WLLADTLNAM MAIPNLTALV LLSPVVFGLT REYFIKQRQL AANKVD
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