Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0646 |
Symbol | |
ID | 4016675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 747436 |
End bp | 748308 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637954631 |
Product | hypothetical protein |
Protein accession | YP_561659 |
Protein GI | 91792008 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATATATA AAAATTACGC AATCCTATTT GCTATCGGCT TTATTTGGGG CTCTCAATTC ATCTTTCAAG AGCTGGCATT AAACAGTTTC TCTCCCATTT GGCTAGGCAG CTGCCGAGCG ATACTTGGGA CAATAACCTT ATCCCTAATA TGTAAAATGA TGGGCCTGAA AGGCGCGAGT AACCAATGGC GACTGTTTAC CTTAATAGGG CTATTGGAGG CTAGCATACC CTTTGTGTTG ATCCCTTGGG GACAGCAACA CTTGACCAGC TCTATCACGG CCATCTTGAT GGGAACGATC CCCTTCTATA CGCTAATGTT CGCCCCACTA TTCATTAAAG ATGCAAGGAT CAGTATGGGG AGTACCCTAA GCCTGATTGT TGGTTTCTGT GGGTTATTGA TCCTATTCTA TCCCGAACTG TCTTCAGGGA CTGGAACGAT AAACCTAACC AGTTCCATAG CAATTATCAT CGCTGCTGTG TGCTTTGCTC TTGCACTACT ATTGCTCAAT CGCGTTAGGG ATGAACATCC ATTAATTGTG GCTCGAAATG TCCTTTCCAT GGCGAGCATT CAACTGATGG TAATTGCACT CATAATGCTC CCAATGGAGT TTACTCAAGC CTCTTTGACT TCAGTATTCT CACTACTTTA CTTAGGAGTG ATATGTGCGG GCGCCGTTTA TTACCTTTAC ATGGTAAGTA TAAAAAATGC GGGAGCAGTA TTCACTTCAA TGACCAATTA TCTAGTCCCT GCAGTTGGGG TGCTAATAGG TGCACTAATC GCGAATGAAT CAATCCAAAC AACAACTTGG GTAGCATTAG CTGTCATTAT TTTCGCCTTA ATTATTAACC AATCAATGAC GATAAAAAAA TAA
|
Protein sequence | MIYKNYAILF AIGFIWGSQF IFQELALNSF SPIWLGSCRA ILGTITLSLI CKMMGLKGAS NQWRLFTLIG LLEASIPFVL IPWGQQHLTS SITAILMGTI PFYTLMFAPL FIKDARISMG STLSLIVGFC GLLILFYPEL SSGTGTINLT SSIAIIIAAV CFALALLLLN RVRDEHPLIV ARNVLSMASI QLMVIALIML PMEFTQASLT SVFSLLYLGV ICAGAVYYLY MVSIKNAGAV FTSMTNYLVP AVGVLIGALI ANESIQTTTW VALAVIIFAL IINQSMTIKK
|
| |