Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0598 |
Symbol | |
ID | 4016628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 682614 |
End bp | 683738 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637954583 |
Product | transposase, IS4 |
Protein accession | YP_561611 |
Protein GI | 91791960 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5433] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATATCG AATCATTCAA GCAGCATTTT AGTGCCATTG ACGACCATCG CCAAAGTGCA AAAGTTACCT ATCCCCTGTT CGATGTACTG TTCGGTTCGC TGTGCGCTGT TATTGCGAGT TCCAATGGCT GGTTCGAGAT CCGAGAATAC ATTCTTGGTC ACCATTCTTG GTTCAAAAAA CAAAAAATGT TCATCGATGG GATCCCTGCT GACGATACCA TTGCCAGGAT AGTTTCTATG ATTGATCCTG ATAGCTTTAA TGCCTGTTTT CTTGCATGGA TGAAGTCAGT TCACCAGCTG ACTAATGGAG AAGTCATTGC GATTGATGGA AAGACGCTAC GTGGTTCATA TAATCGTGAT GATCGAAGCA GCACTATCCA CATGATAAGT GCCTATGCTT CAGCGAATAA GCTGGTACTG GGTCAATTAA AAGCAGAGCA AAAAAGTAAT GAAATCACAG CCATTCCAAC CCTATTAAAA ATGCTAGACC TGCGCGGAGC GCTAGTGACA ATCGATGCTA TGGGCTGTCA AACGGCTATT GCTACAACGA TTATCGACAA AGGTGGTGAC TACCTACTGG CGGTAAAAAA CAATCAAGGC AACTTAGCTA AAGCGGTAAA TAAAGCCTTT AGTCCGCATC GTTCAGCTGG CTTAAGTGAT GACCATGTCA ATATAGAAAA AAGCCATGGT CGTATTGAAA ACCGAACCTG CTATGTGCTG AGTTCTGCTG CACTTGACGG TGATTTTACA CATTGGGAAG CACTCAAATC CATCGTTATG GTTGAAAGCT TTAGGGCTGT TAAAGGTAAG ACGGCGAGCC TTGAATATCG TTACTATATC AGTTCGAAAG TGTTATCAGC AGAGCAAGCC TTAAGTGCGA CTCGCGAACA TTGGGGGATC GAGTCAATGC ACTGGGTCTT GGATGTCAGC ATGAACGAAG ATGAATGCCA GATCTACAAA AATAACGGCG CTGAAAATCT CGCTTACTTA AGGCACATGT CGCTAAACAT GCTGCAAAAA GAACCGACAA AGCTCAGTAT TGTTGGTAAA CGAAAGCGTT GTTTAATGAA TCCAGCATTT CTGGAGAAGG TGTTAATCGC TGGATTATGC GCACCGACTA AATAA
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Protein sequence | MYIESFKQHF SAIDDHRQSA KVTYPLFDVL FGSLCAVIAS SNGWFEIREY ILGHHSWFKK QKMFIDGIPA DDTIARIVSM IDPDSFNACF LAWMKSVHQL TNGEVIAIDG KTLRGSYNRD DRSSTIHMIS AYASANKLVL GQLKAEQKSN EITAIPTLLK MLDLRGALVT IDAMGCQTAI ATTIIDKGGD YLLAVKNNQG NLAKAVNKAF SPHRSAGLSD DHVNIEKSHG RIENRTCYVL SSAALDGDFT HWEALKSIVM VESFRAVKGK TASLEYRYYI SSKVLSAEQA LSATREHWGI ESMHWVLDVS MNEDECQIYK NNGAENLAYL RHMSLNMLQK EPTKLSIVGK RKRCLMNPAF LEKVLIAGLC APTK
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