| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0582 |
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| Symbol | |
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| ID | 4016612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 661252 |
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| End bp | 663381 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637954567 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_561595 |
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| Protein GI | 91791944 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000470025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCACA CTTTCTCTGT TATTTCACTT GCAGTTGTAG GATCTTTGCT CTCGCTCCCC
TTAGTTGCAT TTGCAGATGA TGGTATTGAA CGAATTGCAA TCCACGCAGA GCGTATGCCC
AGTGAGCTAA ACGCTATTGC TCGAAGCGTT TCAGTCATTG ACGAAAACAT GCTACGCCAA
CAATTCGCGA CGGCTAACAA TCTCGCTGAA GTGCTCGCGA AAGTGGTACC CGGCATGGCA
CCCCCCAGTC CCGCGCTGTC CAACTTTGGC ACGACAATAC GTGGTCGTAA TGCCTTAGTA
TTAATTGACG GTGTTCCCAT GAACACCAAT CGTAATATCT CACGCGATTT ACACAACTTG
CACCCAAGCC AAGTTGCCCG TGTGGAAATT TTTCGTGGGG GTAATGCACT TTTTGGCAGT
GGGGCAACGG GCGGTGTGAT CTACATTCAT ACCAAAACAG GCCAAGCCGA AAGTCAGCAA
CACTCTAGAA TCGGTTTAAA ATCTAGCTTA AATGAATTGA GTGGTGATGC ACTCAGCTAC
CTTGTTAGCC ATGCGAGTAG CGGTGAGGCT CAAGGCTGGC TCTACCGTGT TGCGGGTAGT
ACGGAAAAAA CAAATGGCTA TTATGATGCC GATGGTGACC GTTTAGCACC AGAGCCAAGC
CAAGGTGATA GCTATGATAG CCCAATTTAT AGCCTTGATA CCAAGGTCAG CAAAGAATGG
GATAATCAAA AACTGACGCT GTCAGCACTT TGGTACTCAT TAGAGCAAGA TTCTGACTAT
GCCAGCGATC CTTCTGCAGC AACAGAGCCC TACATTACTA AGGCTCGTGC AATTAAAGGC
TTGCAACTTG ATAAACAGAA CGAAATTAAA AACCTCGTCC TTAACGCTCA ATATCAAAGG
CTATTAACCG AAGACGCCAC CCTTCATACG CAAGCGTATT ACCGAGATTA CGCAGCACGC
TTCGCACCGT TTGATGGCCG TCCTTTTGCT ACATGGGATC ATCTGGCACA GACCTATTTA
GAAAGCAGTA ATATAGGCCT TCGAATAACC ATTAACACTC AGTTAAGCGA TAGCATTGAA
CTGGATTGGG GCTTAGATAC CAATGATGAA CGTAGTGAAA TGCCCGTCAC CACTTATGAT
GGCCAAGTAT ATGATGATTC GAACGGTTTA GTATTTCAGC CACTAGGGGA TAAAGATTTT
GTACCCGAGA TTAGCCATAA GTCACTAGCG GGCTTTACAC AAATCCGCGC AAAAATTAGC
AATCAATTTT CCGTTGAAGG CGGATTACGT TATGAACGTA TCGACGCCAG CTTTAAGCCG
TTTGTCACCT TAGGCTCACA AACTGCGGTA CCCGGTAGCA GCTACGACTA CAGCTCATTT
GTTTATAATC TAGGGGGTAC ATACAATATT AACGATGATC ACACCCTATA TTTTGCCACG
AATGAAGGTT ACGACCTCCC AGACATAGGT CTACAAATTC GCTACGCAAG CAGCCAATTT
GATCTTAGTC AGTCTAATTT AGAACCCGTT GAGACAACAG ATTATGAGCT TGGCTGGCGC
GGTGTGGTTG GCCCAATTGC CGCTAACTTT GCTTATTTTA CTTCAAGCTC AGATTTGGGG
AACGTCAAAA GCGAAAATAT GGGGCTGGCT CTCTCACGCA ATAAAGTGCG TATCGATGGC
TTTGAGGCAT CAGCTAACTA CCAAATTAAT ACCGCTTGGT CTGTTGATAT AAATTACAGT
TATATCAATG GTGAGGAAAA ACCTGATGGT AAAATTGATT ACACGACTAT GAATGGTTTT
AGCATCCCAC CTAATAAGCT GGCGGCGGTG TTAGGTTATG AATCGGATAG TGGTTGGAAT
AGCCAATTAA CTTGGCTAAA TGTCGCAGGT AAGGACTATC GCCTTGATGG GAAAAACGCC
TTTGGCCGTC GTGATACCGA GAGCTACAAT GTATTAGACT GGCAAAATAG CTTTGAACTT
GGCGCAGGAA TGTTGACAAT TGGCATTGAA AACCTACTAA ACGAACAGTA TTTTTCGCTA
TACAGCCAGT TACAGCGTAA CTCAAATAAC ACAAGTTCAA TCCCAGGCCG AGGCCGTACA
CTGTCTTTAC AATACCAATT TAATTGGTGA
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| Protein sequence | MNHTFSVISL AVVGSLLSLP LVAFADDGIE RIAIHAERMP SELNAIARSV SVIDENMLRQ
QFATANNLAE VLAKVVPGMA PPSPALSNFG TTIRGRNALV LIDGVPMNTN RNISRDLHNL
HPSQVARVEI FRGGNALFGS GATGGVIYIH TKTGQAESQQ HSRIGLKSSL NELSGDALSY
LVSHASSGEA QGWLYRVAGS TEKTNGYYDA DGDRLAPEPS QGDSYDSPIY SLDTKVSKEW
DNQKLTLSAL WYSLEQDSDY ASDPSAATEP YITKARAIKG LQLDKQNEIK NLVLNAQYQR
LLTEDATLHT QAYYRDYAAR FAPFDGRPFA TWDHLAQTYL ESSNIGLRIT INTQLSDSIE
LDWGLDTNDE RSEMPVTTYD GQVYDDSNGL VFQPLGDKDF VPEISHKSLA GFTQIRAKIS
NQFSVEGGLR YERIDASFKP FVTLGSQTAV PGSSYDYSSF VYNLGGTYNI NDDHTLYFAT
NEGYDLPDIG LQIRYASSQF DLSQSNLEPV ETTDYELGWR GVVGPIAANF AYFTSSSDLG
NVKSENMGLA LSRNKVRIDG FEASANYQIN TAWSVDINYS YINGEEKPDG KIDYTTMNGF
SIPPNKLAAV LGYESDSGWN SQLTWLNVAG KDYRLDGKNA FGRRDTESYN VLDWQNSFEL
GAGMLTIGIE NLLNEQYFSL YSQLQRNSNN TSSIPGRGRT LSLQYQFNW
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