Gene Sden_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0578 
Symbol 
ID4016551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp655984 
End bp656364 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content51% 
IMG OID637954563 
Productpenicillinase repressor 
Protein accessionYP_561591 
Protein GI91791940 
COG category[K] Transcription 
COG ID[COG3682] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGTA AAAAATCGTC GCAATTAACG GATAGTGAGC AAAGCATCAT GGAAGTGCTA 
TGGCAAAAGG GTGAGGCCTC GGTGCGTGAT ATCGCCGATG CGCTGTCTGA AGACAAGGCC
AGTGCCTACA CCACAGTGCA GACCATGTGC AAAATTTTGG TGGAAAAGGG GTACGCGGAA
TTTCGAAAGG AAGGCAAGGC GTTCATCTAT GCACCGACCA TGACCCAAAA AGAAGCCCGT
CAGGGCGCAT TAGCCAGCCT GCTGAATCGT TTCTTTGGTG GCTCGCCCGA AGTGTTAGCC
CAACATCTAA TGCAGGAAAC GGACATAGAG CTTAAAGATC TCGCCGCGCT GCAGCGTCAA
ATCGACGCCA GTAAAGACTA A
 
Protein sequence
MARKKSSQLT DSEQSIMEVL WQKGEASVRD IADALSEDKA SAYTTVQTMC KILVEKGYAE 
FRKEGKAFIY APTMTQKEAR QGALASLLNR FFGGSPEVLA QHLMQETDIE LKDLAALQRQ
IDASKD