| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0576 |
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| Symbol | |
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| ID | 4016549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 652017 |
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| End bp | 655250 |
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| Gene Length | 3234 bp |
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| Protein Length | 1077 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637954561 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_561589 |
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| Protein GI | 91791938 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACAAA AATTAATTCA GGCCGCTGTT GCTAATCGCC TGTTAGTGGT GATTGCCCTA
GTGTGCGCCC TATTGGCGAG CTTAGCGGCT TTGCCTAAGT TAAATCTCGA TGCTTTCCCC
GATGTGACCA ATGTGCAGGT GACCATTAAC ACCGCCGCCG AAGGCTTAGC GGCCGAAGAA
GTGGAGAAGC TCATCAGTTA TCCGGTTGAG TCGGCCATGT ATGCCTTGCC AGCAGTGACG
GATGTACGCT CTTTGTCCCG CACTGGGCTG TCTATTGTGA CTGTGGTGTT CGCCGAGGGC
ACAGATATTT ACTTTGCTCG CCAGCAAGTG TTCGAGCAGT TGCAAGCCGC TAAGGAAATG
ATCCCAACGG GTGTGGGCGT GCCTGAAATT GGCCCTAATA CCTCGGGACT TGGGCAAATT
TATCAGTACA TTCTTAAGGC GGAGCCTGAT TCTGGGGTGA GCGCGTTTGA GCTTAGAAGC
CTGAATGATT ACCTGATAAA GCTGATTTTA ATGCCAGTCT CTGGGGTTAC CGAGGTGTTA
TCTTTTGGCG GCGATGTGCG CCAATATCAG GTGCAGGTCG ACCCCAACAA ACTCAGCAGT
TATGGCTTAT CGATGACCCA AGTCACCACG GCCCTTGAGA GCAATAACCG CAATGCCGGC
GGCTGGTTTA TGGACCAAGG CCAAGAGCAA TTGGTGGTGC GCGGCTACGG CATGTTACCA
GCAGGAAACG AAGGCTTATT GGCCATAGGG CAAATACCGC TAACAGAAGT CAAAGGCACC
CCAGTGCGGG TGGCCGACAT TGCCAAGGTG GCCTTTGGCA GTGAAATCCG CGTCGGCGCC
GTGACCATGA CCCGCCGCGA TGCCAATGGC GATGCTGAAA AACTAGGTGA AGTGGTGGCC
GGAGTGGTAC TCAAGCGCAT GGGGGCGAAC ACTAAATCTA CCATAGATGA CATCAAGGCT
CGGGTAAAAC TCATCGAGCA AGCCTTGCCT AGGGGGGTGT CATTTGAGGT ATTTTACGAC
CAAGCAGATT TAGTCGACCA AGCCATCACC ACAGTGCGTG ATGCGCTACT CATGGCTTTT
GTGTTTATCA TTATCATCTT GGCGCTGTTT TTAGTTAACC TTCGCGCTAC CTTATTGGTT
TTATTATCTA TTCCAGTTTC GATTGGTCTA GCCTTAATGG TAATGTCCTA TTTTGGCCTG
TCGGCTAATT TGATGTCATT AGGCGGCCTT GCCGTAGCCA TAGGTATGCT GGTGGATGGC
TCTGTGGTAA TGGTTGAAAA TATCTTTAAG CATTTAACTC AGCCAGATAG ACGCCATCTT
AAAGCCGCGC AAATGAGGGC CGATGGCGAA GCTGACCCTT ATCACGGCTA TGAAGATGGT
GCTTTGCCCG CCAGTGAGCA TGAGATCGCA TTCGATGAAA ACCATGAGCC CAATATGGCG
CTGCGCATCA TGCTGGCGGC TAAAGAAGTC TGTAGCCCTA TCTTCTTTGC TACCGCGATT
ATTATCGTGG TATTTGCGCC CTTATTTGCC CTAGAAGGAG TGGAAGGTAA GCTGTTTCAG
CCCATGGCGG TGAGTATTAT TCTGGCGATG CTCGCGGCCT TGTTGGTGGC ATTAATTGTC
GTGCCTGCCT TAGCAGTATT CTTATTTAAA AAAGGCGTGG TATTGCGCCA AAGCCCGCTA
TTAGTGCCGC TGGAATCTGG CTATCGCAAA CTATTGACCG CCACCATGGC ACGGCCAAAG
CTTGTGATAT TGGCTGCTGC GGGGCTATTT GTTGGCAGCT TATTGTTAGT GCCAAAATTA
GGGACTGAAT TTGTGCCCGA GCTTGAAGAG GGCACCATTA ACTTGAGGGT AACCTTAGCG
CCCACGGCAA GCCTTGAGAC TTCGCTTGCC GTAGCCCCTA AGATCGAAGC CATGCTGCTT
GAGTTTCCTG AGGTGAGCTA CGCCCTAAGC CGCATTGGTG CGCCAGAGCT TGGCGGCGAT
CCAGAGCCTG TGAGTAATAT CGAGATTTAC ATAGGCTTAA ACCCCATCGA GTCTTGGACC
ACGGCAGATT CACGCCTGGC ATTGCAACGG GAGATGGAAG ACAAACTCAA AGTGTTCCCA
GGCTTGTTGT TTACCTTCTC ACAACCCATA GCCACCCGAG TGGATGAATT ATTGTCGGGC
GTAAAAGCGC AGCTGGCGAT TAAAATCTTC GGAGATTCTC TGGATGTGCT AGCAACTAAA
GGTCAGGTAC TCAGTGACTT AGTGGCTAAA ATACCAGGGG CCGTGGATGT GTCATTAGAG
CAAGTGAGTG GTGAAGCTCA GCTGGTTATT CGCCCTAAGC GGGATAGTTT GGCCCGTTAT
GGCATCAGTG TCGATCAGGT GATGAGTCTG GTGAGTCAAG GCGTTGGCGG TGTTAGTGCC
GGTCAAGTTA TCGATGGTAA TGCCAGATAC GATATCAATG TGCGCTTAGC TAAGTCATTT
AGGCAAACGC CAGATGCAGT GCAAGACTTG CTGCTAGTGG GCGCCAACGG TGCCACAGTA
CGTCTTGGTG ATGTGGCAAG CGTCGAAGTT GAAATGGCGC CACCTAACAT TCGCCGTGAT
GATGTGCAGC GCCGCGTGGT AGTGCAAGCC AATGTTGCAG GGCGAGACAT GGGCTCGGTG
GTGGCGGATA TCTATAAAAT CATTCCCGAG GCGCAGTTGC CTGCGGGCTA CACAGTCGTG
ATTGGCGGTC AATATGAGAA TCAGCAGCGC GCTCAGCAAA AACTGATGTT AGTGGTGCCT
ATTTCCATAG GTTTGATTGC CTTGTTGCTG TATTTCTCCT TTGGCTCGCT AAAGCAAGTG
GGGCTAATTA TGGCAAACGT GCCTTTAGCG CTGTTTGGTG GGGTTATCGC CTTGTACCTT
AGTGGCACTT ATTTGTCAGT GCCTAGCTCC ATAGGGTTTA TCACCTTGTT TGGGGTGGCA
GTGCTTAATG GCGTGGTCTT GGTGGACTCG ATAAACCAGC GCCGTCAAAG CGGCGAAAGC
CTATATGAGT CAGTCTATGA AGGCACGGTT GGACGTTTGC GGCCCGTATT AATGACGGCG
CTGACATCGG CATTGGGACT CATCCCAATT TTAATGTCAT CTGGGGTGGG CAGTGAAATT
CAAAAGCCCT TAGCCGTGGT TATCATCGGC GGTCTGTTTA GCTCTACCGC CTTAACCTTG
CTGGTATTAC CTACTCTGTA CCGCTTTTTA TATCAAGCTA AGCGCAACAG CTAA
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| Protein sequence | MLQKLIQAAV ANRLLVVIAL VCALLASLAA LPKLNLDAFP DVTNVQVTIN TAAEGLAAEE
VEKLISYPVE SAMYALPAVT DVRSLSRTGL SIVTVVFAEG TDIYFARQQV FEQLQAAKEM
IPTGVGVPEI GPNTSGLGQI YQYILKAEPD SGVSAFELRS LNDYLIKLIL MPVSGVTEVL
SFGGDVRQYQ VQVDPNKLSS YGLSMTQVTT ALESNNRNAG GWFMDQGQEQ LVVRGYGMLP
AGNEGLLAIG QIPLTEVKGT PVRVADIAKV AFGSEIRVGA VTMTRRDANG DAEKLGEVVA
GVVLKRMGAN TKSTIDDIKA RVKLIEQALP RGVSFEVFYD QADLVDQAIT TVRDALLMAF
VFIIIILALF LVNLRATLLV LLSIPVSIGL ALMVMSYFGL SANLMSLGGL AVAIGMLVDG
SVVMVENIFK HLTQPDRRHL KAAQMRADGE ADPYHGYEDG ALPASEHEIA FDENHEPNMA
LRIMLAAKEV CSPIFFATAI IIVVFAPLFA LEGVEGKLFQ PMAVSIILAM LAALLVALIV
VPALAVFLFK KGVVLRQSPL LVPLESGYRK LLTATMARPK LVILAAAGLF VGSLLLVPKL
GTEFVPELEE GTINLRVTLA PTASLETSLA VAPKIEAMLL EFPEVSYALS RIGAPELGGD
PEPVSNIEIY IGLNPIESWT TADSRLALQR EMEDKLKVFP GLLFTFSQPI ATRVDELLSG
VKAQLAIKIF GDSLDVLATK GQVLSDLVAK IPGAVDVSLE QVSGEAQLVI RPKRDSLARY
GISVDQVMSL VSQGVGGVSA GQVIDGNARY DINVRLAKSF RQTPDAVQDL LLVGANGATV
RLGDVASVEV EMAPPNIRRD DVQRRVVVQA NVAGRDMGSV VADIYKIIPE AQLPAGYTVV
IGGQYENQQR AQQKLMLVVP ISIGLIALLL YFSFGSLKQV GLIMANVPLA LFGGVIALYL
SGTYLSVPSS IGFITLFGVA VLNGVVLVDS INQRRQSGES LYESVYEGTV GRLRPVLMTA
LTSALGLIPI LMSSGVGSEI QKPLAVVIIG GLFSSTALTL LVLPTLYRFL YQAKRNS
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