Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0562 |
Symbol | |
ID | 4016535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 635979 |
End bp | 636500 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637954547 |
Product | hypothetical protein |
Protein accession | YP_561575 |
Protein GI | 91791924 |
COG category | [S] Function unknown |
COG ID | [COG3812] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTACG ATCTGACCGT TGTACAATTT AGCAAGATGC TAAAAAATTT GAATGCTATT TTTGATAAGG CCGAGGCATT TGCTGAGCTC AAAAAAGTGG ATATGGACGT GTTATTGAAT TCACGCTTAG CGGCGGACCA ATTCAATCTT ATCCGTCAGG TGCAAATCGC CTGCGATACG GCCAAAGTCG GCGTTGCCCG TTTAACTGGC CAGTTAGAGA CAGCACCAAA GCACGATGAC AGCGAAACCA CCTTGGCTGA ACTTCGTCAA CGTATTGCCT CAGTACTTAC ATACCTTGAA GGTTTTAGCG AAGCCGATTT TGCCAATGCG GCTACTATCC AAATATCACA GCCACGCTGG CAAGGTAAGT ACCTCACGGG CTATGAATTT GCCATAGAAC ATGCCATTCC TAACCTCTAT TTCCACATCA CCACCGCCTA CGGCATATTG CGTCATAACG GTGTAGAAGT GGGTAAGAAA GACTACCTAG GCGCCATGCC TTATAAAGCG CCAATTCTTT AA
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Protein sequence | MLYDLTVVQF SKMLKNLNAI FDKAEAFAEL KKVDMDVLLN SRLAADQFNL IRQVQIACDT AKVGVARLTG QLETAPKHDD SETTLAELRQ RIASVLTYLE GFSEADFANA ATIQISQPRW QGKYLTGYEF AIEHAIPNLY FHITTAYGIL RHNGVEVGKK DYLGAMPYKA PIL
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