Gene Sden_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0562 
Symbol 
ID4016535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp635979 
End bp636500 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content46% 
IMG OID637954547 
Producthypothetical protein 
Protein accessionYP_561575 
Protein GI91791924 
COG category[S] Function unknown 
COG ID[COG3812] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTACG ATCTGACCGT TGTACAATTT AGCAAGATGC TAAAAAATTT GAATGCTATT 
TTTGATAAGG CCGAGGCATT TGCTGAGCTC AAAAAAGTGG ATATGGACGT GTTATTGAAT
TCACGCTTAG CGGCGGACCA ATTCAATCTT ATCCGTCAGG TGCAAATCGC CTGCGATACG
GCCAAAGTCG GCGTTGCCCG TTTAACTGGC CAGTTAGAGA CAGCACCAAA GCACGATGAC
AGCGAAACCA CCTTGGCTGA ACTTCGTCAA CGTATTGCCT CAGTACTTAC ATACCTTGAA
GGTTTTAGCG AAGCCGATTT TGCCAATGCG GCTACTATCC AAATATCACA GCCACGCTGG
CAAGGTAAGT ACCTCACGGG CTATGAATTT GCCATAGAAC ATGCCATTCC TAACCTCTAT
TTCCACATCA CCACCGCCTA CGGCATATTG CGTCATAACG GTGTAGAAGT GGGTAAGAAA
GACTACCTAG GCGCCATGCC TTATAAAGCG CCAATTCTTT AA
 
Protein sequence
MLYDLTVVQF SKMLKNLNAI FDKAEAFAEL KKVDMDVLLN SRLAADQFNL IRQVQIACDT 
AKVGVARLTG QLETAPKHDD SETTLAELRQ RIASVLTYLE GFSEADFANA ATIQISQPRW
QGKYLTGYEF AIEHAIPNLY FHITTAYGIL RHNGVEVGKK DYLGAMPYKA PIL