Gene Sden_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0557 
Symbol 
ID4016931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp631241 
End bp631945 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content48% 
IMG OID637954542 
Productresponse regulator receiver 
Protein accessionYP_561570 
Protein GI91791919 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGTTG AAAAACACAT ATTAGTGGTG GAAGACGATA CCTCACTGGC TGAGTGGATC 
AGTGATTATT TATTGGATCA TGGCTATGGG GTGACAGTTG CGAGTCAAGG TGATTACGCC
TTGGAAATGA TTGCCGATGA GCTACCTGAC TTGGTGCTAC TTGATGTCAT GATCCCAGTA
AAAAATGGTT TCGATGTCTG CAAAGAGGCG AGGGAATTCT ATTCTGGACC TATCTTATTT
ATGACGGCCT GCGTTGAAGA TGGCGACGAA ATTCAGGGGC TGGAAATGGG CGCCGATGAT
TACCTCACTA AACCCATTCG GCCGCAAGTC TTGCTGGCTC GGATTAAAGC GCTATTGCGC
CGTGCCAGTG ATGAAGAGCC TAAACAGCAG TTGGTATTTG GCGCGCTAGT GCTTAATGCT
ACCGCGAAAA CCGTCACGGT TCATCAGCAA GCTGTAGGGC TTAATGACAA TGAATTCGAT
GTGTTATGGC TGCTGGCACT GCAGGCTGGC ACAGTGGTGA GTCGCATCGA TTTAGTGTCA
CAGCTTAGGG GTATAGAATA TGATGGCCTA GATCGCTCTG TGGATATTCG CGTGTCGCGG
CTGCGTAAAA AACTTCAAGA AGCTCAAGAC CAGCCCTATA AAGTTAAAAC CATTCGTGGT
AAAGGTTACT TGTTTTGCCG CGATGACGCA GCGCCCAAAT CATGA
 
Protein sequence
MTVEKHILVV EDDTSLAEWI SDYLLDHGYG VTVASQGDYA LEMIADELPD LVLLDVMIPV 
KNGFDVCKEA REFYSGPILF MTACVEDGDE IQGLEMGADD YLTKPIRPQV LLARIKALLR
RASDEEPKQQ LVFGALVLNA TAKTVTVHQQ AVGLNDNEFD VLWLLALQAG TVVSRIDLVS
QLRGIEYDGL DRSVDIRVSR LRKKLQEAQD QPYKVKTIRG KGYLFCRDDA APKS