| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0551 |
|---|
| Symbol | |
|---|
| ID | 4016925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 623922 |
|---|
| End bp | 624443 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637954536 |
|---|
| Product | HPP |
|---|
| Protein accession | YP_561564 |
|---|
| Protein GI | 91791913 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAT TAAAAGGCGG CGGCTCACTT CCACCACGCC CATCACTGCT CCAACTTTTA
AAAGGATTAA TTGGCGGTAC ACTTGGAATT CTTTGTTTAT GTCTTCTTGG TCAGTACTCA
GGAGTTCCTT GGCTAATGGC GCCATTTGGC GCCACATGCG TCATCCTGTT TGCCGCACCA
ACATCCCCTC TAGCACAGCC AAGAAATGTT ATAGGTGGCC ACTTTATCGC GGCATCTGTC
GGTATAGCCG CACTTTACGG ATTGGGTGAT TCATACATTA CTATGTCTGT GGCAGTCGGC
GTCGCAATCG TAGCCATGCA ATTTTTGCGT GCGGTACACC CTCCGGCTGG GGCCAATCCA
ATCGTGATTA TACTTGCGGG CAAGTCTGCG GTCAGTTTGA GCTTCTTATT TACTCCGGTT
CTTGTTGGCA GTGTACTACT GGTTGTTATC GCATCCCTTG TAAACAACTA TGGCGTAAAA
GATGGTTGGC CTGTCTACTG GCACGGATTT GGTAAAACAT AA
|
|---|
| Protein sequence | MNKLKGGGSL PPRPSLLQLL KGLIGGTLGI LCLCLLGQYS GVPWLMAPFG ATCVILFAAP
TSPLAQPRNV IGGHFIAASV GIAALYGLGD SYITMSVAVG VAIVAMQFLR AVHPPAGANP
IVIILAGKSA VSLSFLFTPV LVGSVLLVVI ASLVNNYGVK DGWPVYWHGF GKT
|
|---|
| |