Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0529 |
Symbol | |
ID | 4016863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 597657 |
End bp | 598448 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637954515 |
Product | hypothetical protein |
Protein accession | YP_561544 |
Protein GI | 91791893 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00670346 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGATC TTGAGCTCGC TTCAATCTTA TTACCCGCAT TTGCAGCCGG TATTTTAGTG TTATCAACCC ATGTGCTGCT GGGCAGACAA GTCTTGGCCA GAGGGATCAT TTTTATCGAT TTGGCCATAG CCCAAGTGGC GGCACTTGGG GCCATCGTCT CTCACATAGA TCACAGGATT GAGAGTTTGG CTTATGCCCA TGTGTGGATG CCTGCATTAT TTGCTCTCGG CGGTGCGGGG ATTATCGCTT GGCTAGCTAA GCATTTTGAA ACCGAGCTCG AGGCCTTTAT TGGTTGCTTC TATGTGCTTA GCGCTGTGGC GGCTATGCTA TTGTTGGCAA ATGACCCCCA CGGCGGCGAG CTATTAAAGC AATTAATGTC GGGGCAAATT CTCTGGGTCA GTTGGGATGA TTTACTCTTG CCCATGCTAG TGTCTATGCT CGTGCTGGTC TTGATAGCCC TGAGGCCATC CTTGTTAGCT GGCAATAGTT TTTACTTTCT ATTTGCCATT GTCATCACGC TTTCTGTGGA GCTAGTTGGG GTGTACTTAG TATTTAGCAG TCTGATTTTA CCTGCATTAG CCGTGAATCG ACTCAAGACG AATAACAGGC TTTGGTATGC CTATGCCGTA GGCATGTTGG GCTTTTTTAT CGGTTTAATG CTCTCGGCTA GCTACGACTT ACCCAGTGGC GCTGCGATAG TGGCAACACT GGCGCTCTGC TGTTTAGTCT TTAGATTATT GGCTCATGTT GTTGGCTTGC TCCAGAGCCA TAGGGGTAAG GCACAAGCTT AG
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Protein sequence | MIDLELASIL LPAFAAGILV LSTHVLLGRQ VLARGIIFID LAIAQVAALG AIVSHIDHRI ESLAYAHVWM PALFALGGAG IIAWLAKHFE TELEAFIGCF YVLSAVAAML LLANDPHGGE LLKQLMSGQI LWVSWDDLLL PMLVSMLVLV LIALRPSLLA GNSFYFLFAI VITLSVELVG VYLVFSSLIL PALAVNRLKT NNRLWYAYAV GMLGFFIGLM LSASYDLPSG AAIVATLALC CLVFRLLAHV VGLLQSHRGK AQA
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