| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0528 |
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| Symbol | |
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| ID | 4016862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 596704 |
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| End bp | 597651 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954514 |
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| Product | periplasmic solute binding protein |
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| Protein accession | YP_561543 |
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| Protein GI | 91791892 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000128694 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCATCA ATTTTAAGCA AAAATTATAC TTGGGCTTAA TCGCATTTGC ATCGTTAAGC
TCATTTTACA GTGTCTCAGC TAGGGCCGAG TTAAATGTAT TCGCCTGTGA ACCTGAGTAT
GCCGCGTTAG TGCAAACCTT GGCGCCCAAT GCCAAGGTTT ATAGTGCGAC TACGGCCATG
CAAGACCCAC ATCAAGTGCA AGCTAGGCCG AGTCTTATTG CTAAGCTGAG GCAGGCTGAT
CTACTGGTAT GCGCCGGAGG CGATCTTGAA ATCGGCTGGC TGCCTATGTT GCAAATGAAG
GCATCTAACT CCCAGGTCTT AAGCACAGAT AAAGGTTTGT TCTTTGCCAC TGAACAAGTG
CAAACCTTAG ATAAGCTGAC TCAAGTGGAC AGAAGCATGG GGGATGTGCA TGAAAAAGGT
AATCCTCATG TGCATTTTGA TCCTGAGCGC ATGTTGCAAA TTGCCGAGGC GTTGACGCAA
AAGCTCATTA GTCTCGATAT TGAGCACCAA GCTGAGTACC AACAGAACTT ACAGGGTTTT
AGCTCAGATT GGCAGGTGGC GATGCAGCGC TGGCAGCAGC AGGCTAAGCC ATTGCAAGGG
CGCAAGGTTA TCGCTTATCA CTCAAGCTTT AGGTACTTGT TTGCCTGGCT TGGCATGGAG
CAGGTGGCAG ATCTTGAACC TAAGCCTGGT TTGGCGCCGA CCACCAGTCA TTTAGTCAGC
TTGCTCGAGC GGACAAAAAT GGGTGATGTG ATGGCTGTGG TGGTGGCGTC TTATCAAGAT
GAGCGCGGCG GAGTTTGGCT GGCAGACAGG GCTAAGTTAC CTTTGCTGGT GCTGCCCATG
TCTGTGGGGG GCAATGATGA CAGCACTGAT TTAATCAGCT TGTATGACAG CGTGCTGACC
ATTCTCACCA ATGCAGCAGA AACCACTGCG GCTACATCAG GAGAGTGA
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| Protein sequence | MRINFKQKLY LGLIAFASLS SFYSVSARAE LNVFACEPEY AALVQTLAPN AKVYSATTAM
QDPHQVQARP SLIAKLRQAD LLVCAGGDLE IGWLPMLQMK ASNSQVLSTD KGLFFATEQV
QTLDKLTQVD RSMGDVHEKG NPHVHFDPER MLQIAEALTQ KLISLDIEHQ AEYQQNLQGF
SSDWQVAMQR WQQQAKPLQG RKVIAYHSSF RYLFAWLGME QVADLEPKPG LAPTTSHLVS
LLERTKMGDV MAVVVASYQD ERGGVWLADR AKLPLLVLPM SVGGNDDSTD LISLYDSVLT
ILTNAAETTA ATSGE
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