Gene Sden_0522 details

Gene Information

• Locus tag: Sden_0522
• Symbol: alr
• ID: 4017121
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 591695
• End bp: 592786
• Gene Length: 1092 bp
• Protein Length: 363 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637954508
• Product: alanine racemase
• Protein accession: YP_561537
• Protein GI: 91791886
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0787] Alanine racemase
• TIGRFAM ID: [TIGR00492] alanine racemase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000197654
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAACCTT TTCCCCGCGC AGAAATCAGC CGCAAGGCAT TGCAAGCTAA CTTGGCTCGC 
ATTCGAGAAT TAGCCCCGCA GAGTAAAATC ATGGCTGTGG TGAAGGCGAA TGGCTATGGC 
CATGGTTTAT TGAATGTGGC TAACAGTGTG GCCACTTATG ATCAAGGCGC CGATGGTTTC 
GGCTTGGCGC GATTGGAAGA AGCCTTAGAG CTTAGAAGTG GCGGCGTTAA TGCAAGGCTA 
TTGTTACTCG AAGGCTTTTT TAGGGTCACA GACTTACCCT TATTGGTGCA ACATCATATC 
GATACTGTGG TGCACCACGA ATCACAAGTG GAGATGTTAG AGCAGGCTGA ACTCACTACG 
CCGGTTACCG TATGGATGAA AATCGATACT GGCATGCACA GGTTAGGCTT TAGTTTGGCT 
CAGTTTGACG CCATTTATCA GCGCTTGCTG GCATGTCACA ACATCGCTAA GCCGATACAC 
TTGATGACGC ACTTTGCTTG TTCGGATGAG CCTGATAACA GTTTTACTCA AGCGCAAATC 
GATGCATTTG AAAGCGTGAC AGCCTCCCTT GACGGGGACA GAAGTCTTGC CAACTCTGGA 
GGAATGCTTT TTTGGCCTCA GAGTCAACGA GACTGGATCC GTGCTGGTAT CGCACTCTAT 
GGGGTGTCGC CTATGGTGGG GGATAAAGGC GGTAATCATG GTTTAGTGCC AGCAATGGAG 
CTTAAGTCTC AGTTGATTTC GGTCAAAGAT CATCAGGCGG GTGACAGTGT CGGTTATGGG 
GCTTTTTGGC GAGCCCGCAA AGATACCCGC ATCGGCGTGG TCGCCATAGG TTATGGCGAT 
GGCTACCCAA GACATGCCCC AGAGGGCACG CCTGTGTGGC TCAATGGCCG CAGGGTGCCT 
ATCGTTGGCC GCGTGTCTAT GGATATGTTA ACCGTTGATT TAGGTTTAGA TTCCCAAGAT 
AAAGTGGGTG ATGAAGTTCT ACTCTGGGGT AGCGCACTGG CGGTGGAAGA AGTGGCAGAC 
CATATTGGCA CCATAGCCTA TGAGTTAGTC ACCAAGTTAA CCCCTAGGGT TGCAGTAGCC 
TTACTGCCTT AG 

 

Protein sequence

MKPFPRAEIS RKALQANLAR IRELAPQSKI MAVVKANGYG HGLLNVANSV ATYDQGADGF 
GLARLEEALE LRSGGVNARL LLLEGFFRVT DLPLLVQHHI DTVVHHESQV EMLEQAELTT 
PVTVWMKIDT GMHRLGFSLA QFDAIYQRLL ACHNIAKPIH LMTHFACSDE PDNSFTQAQI 
DAFESVTASL DGDRSLANSG GMLFWPQSQR DWIRAGIALY GVSPMVGDKG GNHGLVPAME 
LKSQLISVKD HQAGDSVGYG AFWRARKDTR IGVVAIGYGD GYPRHAPEGT PVWLNGRRVP 
IVGRVSMDML TVDLGLDSQD KVGDEVLLWG SALAVEEVAD HIGTIAYELV TKLTPRVAVA 
LLP