| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0512 |
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| Symbol | |
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| ID | 4017111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 581674 |
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| End bp | 582414 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954498 |
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| Product | 23S rRNA (guanosine-2'-O-)-methyltransferase |
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| Protein accession | YP_561527 |
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| Protein GI | 91791876 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.801962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC AAGATTTTAT ATACGGTATC CACGCCATTG AGTCACTGTT AACTCATAGT
CCAGAGCGTA TTCTTGAACT TTGGGTGCTA CAAGGCCGTG ATGATGATCG TTTAGCGCCG
CTGTTGAAGG CAGCTCAAGA CTTTGGTTGC ACCGCCCAGC GCGCTACTAA AAAAACCTTA
GATGAAAAAG CCGATAGCAG CCAACATCAA GGGGTAGTAG CAAGAGTTCA GGCCGCTAAG
GTTTTGGCTG AAAACGAACT TGATGCGCTT CTCGATAGCA CAGAAGTGCC TTTTTTGTTG
ATTTTAGATG GTGTGACGGA TCCACACAAC TTAGGTGCCT GCTTACGTAA TGCAGACGCT
GCGGGGGTAC AAGGCATCAT AGTGCCTAAA GACAACTCAG CAGGACTTAC GCCTACAGTC
AGTAAGGTCG CTTGTGGCGC GGCGGAAACC GTGCCTTTGT TTCAGGTCAC CAACTTAGCC
CGCACCATGC GCCATTTACA AGACCGTGGT GTGTGGATTG TGGGTACCGC CGGTGAAGCC
GATGGAGCGC TTTATCAGGC AGAGCTCACA GGACCGCTGG CGATTGCCAT GGGCGCCGAA
GATAAAGGTC TTCGCCGTTT GTCTCGTGAG GCCTGTGATA AGTTAGTTTC TATCCCCATG
GCGGGCAGTG TATCCAGTTT AAATGTTTCT GTGGCCACGG GTGTGTGTCT GTTTGAAGCT
GTGCGTCAGC GGATTAAGTA G
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| Protein sequence | MKKQDFIYGI HAIESLLTHS PERILELWVL QGRDDDRLAP LLKAAQDFGC TAQRATKKTL
DEKADSSQHQ GVVARVQAAK VLAENELDAL LDSTEVPFLL ILDGVTDPHN LGACLRNADA
AGVQGIIVPK DNSAGLTPTV SKVACGAAET VPLFQVTNLA RTMRHLQDRG VWIVGTAGEA
DGALYQAELT GPLAIAMGAE DKGLRRLSRE ACDKLVSIPM AGSVSSLNVS VATGVCLFEA
VRQRIK
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