Gene Sden_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0502 
Symbol 
ID4017792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp570281 
End bp571540 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content48% 
IMG OID637954488 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_561517 
Protein GI91791866 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase 
TIGRFAM ID[TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0203254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAAAT TAACGATTCA AGCCAGCAAG CCGTTAACTG GCAGTGTAGT GATCTCTGGC 
GCTAAAAATG CCGCACTACC TATTTTAATG GCCGGCGTCC TCGCCGAAAC TGACTTTGTG
TTATCTAACG TACCTGAGCT TAGAGATGTC AGCACCAGCT GTAAATTATT ACGCTGTTTA
GGTGCTGAAG TTGATGAACT GGGTGGGGGT CGCATTCGTA TTTCGACCAC CAATTTGAAT
GAGTTTTGTG CGCCTTACGA TTTAGTTAAA ACCATGCGCG CTTCCATTCT TATCTTAGGC
CCATTATTGG CCCGTTTTGG TACCGCTGAT GTTTCTCTCC CTGGAGGCTG CGCCATAGGT
GCACGTCCGG TGAACCTGCA TTTGCATGGT TTGGAGCAAA TGGGCGCAAA AATCGAAGTC
AAAGAAGGTT ACATCAAAGC CAGAGTGGAT GGTCGTCTTA AAGGCGCGCA CATCTTTATG
GACATGATAA GCGTAGGTGC TACCGAAAAC TTACTGATGG CCGCTGCATT AGCCGATGGC
ATAACGATCA TTGAAAATGC CGCTCAAGAG CCTGAAGTCA CAGACTTAGC TCACTGCTTG
ATTGCCATGG GAGCAAAAAT CACCGGTGTG GGCACAGCGA CCTTAAAGAT AGAAGGTGTT
GAGCGCTTAC AAGGTTGTGA ATACCGCGTG ATGCCAGATC GTATTGAAAC CGGTACTTTC
TTGGTCGCTG CGGCTGTAAC GCGGGGGAGA ATTCGCTGTG AAAATGCAGA TCCTGCCTCA
ATGGAAGCCG TGCTTGCCAA GCTTGAAGAT GCTGGCGCTA CCGTCACGAG TGGTGAGGAT
TGGATTGAGC TTGATATGCA TGGCAAGCAG CCTAAAGCGG TTAACATTAA AACGGCGCCC
TATCCGGCAT TCCCAACGGA TATGCAGGCT CAGTTTTGTG TGCTGAATGC CTTAGCTCAA
GGCACGGGAC GTGTCACTGA AACCATCTTT GAAAATCGTT TTATGCACGT CCCTGAGCTT
ATTCGAATGG GTGCAAACAT GGAGCTTGAA GGCCATACTT GCATCATTCA AGGGATAGAC
AAGCTTAACG GTGCTCAGGT GATGGCAACA GATTTACGCG CATCGGCAAG CTTAGTTATC
GCAGGTTTGA TGGCTGAAGG CACCACGCTG GTCGATCGTA TTTATCACTT AGATCGCGGC
TATGAGCATA TTGAATCTAA GTTCCAAGGC CTAGGTGCTG AAGTAATTCG AGTGAAATAA
 
Protein sequence
MDKLTIQASK PLTGSVVISG AKNAALPILM AGVLAETDFV LSNVPELRDV STSCKLLRCL 
GAEVDELGGG RIRISTTNLN EFCAPYDLVK TMRASILILG PLLARFGTAD VSLPGGCAIG
ARPVNLHLHG LEQMGAKIEV KEGYIKARVD GRLKGAHIFM DMISVGATEN LLMAAALADG
ITIIENAAQE PEVTDLAHCL IAMGAKITGV GTATLKIEGV ERLQGCEYRV MPDRIETGTF
LVAAAVTRGR IRCENADPAS MEAVLAKLED AGATVTSGED WIELDMHGKQ PKAVNIKTAP
YPAFPTDMQA QFCVLNALAQ GTGRVTETIF ENRFMHVPEL IRMGANMELE GHTCIIQGID
KLNGAQVMAT DLRASASLVI AGLMAEGTTL VDRIYHLDRG YEHIESKFQG LGAEVIRVK