Gene Sden_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0494 
Symbol 
ID4017784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp564634 
End bp565611 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content51% 
IMG OID637954480 
ProductKpsF/GutQ family protein 
Protein accessionYP_561509 
Protein GI91791858 
COG category[T] Signal transduction mechanisms
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0102894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAATC AAAACCAGTG GCGCCAATGG GGCTGCAAAG TCATTGATAT AGAGAAAGCT 
GCCCTAGAGC ACCTCTACCA GTTTGTCGAC TCTGATGCGT TTAGTCAGGC CTGTGAATTG
ATCTTACAGT GTAAAGGTAA GGTCATCGTC ATGGGCATGG GGAAATCAGG CCATATTGGC
AATAAAATAT CGGCAACGCT GGCCAGCACG GGCACCCCCG CCTTTTTTGT CCACCCGGGT
GAAGCCAGCC ACGGCGACTT AGGCGCACTG GCCAAAGAAG ACATCATTTT AGCCATTTCA
AACTCGGGTG AGTCCAGTGA GATCTTAACC TTACTGCCAG TCATTCAACG CATGGGGGTT
CCGGTTATTG CCATCACAGG CAAGCCTGAG TCCAACATGG CCAAGCTTGC CAAGATACAT
TTATGCATCC AAGTGCCCGA AGAGGCCTGC CCCCTAGGAC TCGCGCCGAC GTCAAGCACC
ACGGCAACCT TAGTGATGGG CGATGCCCTC GCCGTTGCTT TACTGCAAGC TAAAGGCTTT
ACTCAGGACG ATTTTGCCCT TTCACATCCT GGCGGCTCCC TAGGTCGTAA ATTGTTATTG
AAAGTCAGTG ATGTCATGCA TCAAGATGAC AGGCTACCTT GCGTACCTCA CGATATTTGC
ATCACTGAAG CCCTGTATGA AATCTCCAAG AAAGGTTTAG GCATGACAGC TGTCGTCGAT
GCTAACCAAT GCTTAGTGGG GATTTTCACC GATGGCGATT TGCGCCGAGT CATAGACGCC
GAAGTGAACT TGCGCACCAC CCCCATAGAG CAAGTCATGA CCAAGAACTG TGTCACCACC
ACGGCAGGCA TTTTAGCGGC CCAGGCGTTG CAAGTGATGG AGAGCAAGAA TATTAACGGC
CTAATCGTGG TCAATGAACA GCAGCAACCG ATTGGCGCAT TGAATATGCT CGATATGGTC
AAAGCAGGAG TGATATAG
 
Protein sequence
MVNQNQWRQW GCKVIDIEKA ALEHLYQFVD SDAFSQACEL ILQCKGKVIV MGMGKSGHIG 
NKISATLAST GTPAFFVHPG EASHGDLGAL AKEDIILAIS NSGESSEILT LLPVIQRMGV
PVIAITGKPE SNMAKLAKIH LCIQVPEEAC PLGLAPTSST TATLVMGDAL AVALLQAKGF
TQDDFALSHP GGSLGRKLLL KVSDVMHQDD RLPCVPHDIC ITEALYEISK KGLGMTAVVD
ANQCLVGIFT DGDLRRVIDA EVNLRTTPIE QVMTKNCVTT TAGILAAQAL QVMESKNING
LIVVNEQQQP IGALNMLDMV KAGVI