| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0468 |
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| Symbol | hemE |
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| ID | 4016651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 536786 |
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| End bp | 537850 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954454 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_561483 |
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| Protein GI | 91791832 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.551624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAT TAAAAAACGA TCGTTACCTA CGCGCCCTGT TAAAACAGCC TGTCGATGCA
ACGCCTGTAT GGATGATGCG CCAAGCTGGA CGTTACTTAC CAGAGTACAA GGCAACGCGC
GCCCAGGCCG GCGATTTTAT GTCTCTATGC CGTAATGCCG AGCTCGCCTG CGAAGTGACA
CTGCAGCCAC TGCGTCGCTA CAAGTTAGAC GCCGCCATCT TGTTTTCTGA TATTTTAACT
GTGCCAGATG CCATGGGCTT AGGTTTGTAT TTCGAGGAGG GCGAAGGCCC ACGTTTTGAG
CGTCCAACTG ACACTGTGGA TGCCATTAAA AAGCTGTGTA TCCCAGATCC TGAAGATGAA
TTAGGTTATG TGATGCGTGC CGTAAGCACG ATTCGCCGTG AGCTTAAGGG CGAAGTGCCT
TTGATTGGCT TCTCTGGCTC GCCTTGGACA TTAGCCACCT ACATGGTGGA AGGTGGTTCT
AGCAAGACGT TTGAGAAAAT TAAGAAAATG GCCTATGCCG AGCCTGCGGC CTTGCACATG
TTGTTAGATA AGCTTGCCGA TTCGGTGATT TTATATTTGA ATGCTCAAGT CGCTAACGGT
GCTCAGTCGC TAATGATTTT CGACTCTTGG GGCGGTGCAT TGTCTCACCA TGCCTACCGT
GAGTTTTCAC TGCGTTACAT GCAGAAAATT GTTGATGGCT TGACTCGTTT TGCCGATGGC
CGCCAAGTAC CTGTGACTTT ATTCACTAAA GGCGGCGGTT TATGGCTTGA GTCTATGGCT
GAAACTGGCT GTGATGCCTT AGGCCTTGAT TGGACTGTGG ATATTGGTGA TGCTCGTCGC
CGTGTGGGCG ATAAAGTTGC CCTGCAAGGC AATATGGATC CTTCTATGTT ATATGCAAGC
CCAGAGCGCA TCCATCAGGA AGTGGGTCAA ATCCTCTCAA GCTACGGCAA GGGGACTGGC
CATGTATTTA ACTTAGGCCA TGGTATTCAT CAGCATGTTG ATCCAGAGCA CGCTGGCGCC
TTTATCAACT CAGTGCATGA GTTGTCGCCC CAATACCATA AGTAG
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| Protein sequence | MAELKNDRYL RALLKQPVDA TPVWMMRQAG RYLPEYKATR AQAGDFMSLC RNAELACEVT
LQPLRRYKLD AAILFSDILT VPDAMGLGLY FEEGEGPRFE RPTDTVDAIK KLCIPDPEDE
LGYVMRAVST IRRELKGEVP LIGFSGSPWT LATYMVEGGS SKTFEKIKKM AYAEPAALHM
LLDKLADSVI LYLNAQVANG AQSLMIFDSW GGALSHHAYR EFSLRYMQKI VDGLTRFADG
RQVPVTLFTK GGGLWLESMA ETGCDALGLD WTVDIGDARR RVGDKVALQG NMDPSMLYAS
PERIHQEVGQ ILSSYGKGTG HVFNLGHGIH QHVDPEHAGA FINSVHELSP QYHK
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