| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0449 |
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| Symbol | |
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| ID | 4017220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 519642 |
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| End bp | 520940 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954435 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | YP_561464 |
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| Protein GI | 91791813 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA CACATTTATC TACACAAAGA TTTGCCGATC TTCCTCTACA TGCTGAGGTA
ATTCAGGCAC TAAACGAAAA TGGCTTTGAG TTTTGTACGC CAATTCAGGC GTTATCCTTA
CCTGTTTTAT TAAAAGCAAA AGATATAGCA GGGCAAGCTC AAACAGGTAC AGGTAAAACT
ATGGCCTTCC TAGTGGCCAC TTTTAACCAC CTATTAACCA CGCCTGCACC TCAGGCCCGT
GAATTGAATC AACCTAGGGC CATTATTATG GCGCCTACTC GCGAATTGGC TATCCAAATC
GCCAAAGATG CCAACTTGCT TGCTAAGCAC ACTGGCCTTA AAGTCGGCAT AGTCTATGGC
GGCGAAAGTT ACGAAGTACA ACGTGAAGTA TTGGATAAAG GCGTGGATAT CTTAATTGGT
ACCACAGGAC GGATCATTGA CTATGTACGT CAAGGCGTTA TCAGCCTGAA CTCCATTCAA
GCCGTGGTAC TGGATGAAGC CGATCGTATG TTCGATCTCG GTTTTATCAA AGACATCCGC
TTCTTGTTCC GTCGTATGCC AGACGCCTCT TCTCGTCTCA ACATGTTGTT CTCCGCCACC
TTGTCGATGA AAGTGCAAGA ACTGGCTTAT GATCACATGA ATGATCCTGA AAAGGTGGAA
GTCACCCCAG AAGAGAAAAC CTCTAAGAAC ATCAAAGAAG AGATTTTCTA TCCTTCAACC
GAAGATAAGA TGCGTCTGTT GTTGACCTTG ATGGAAGAAG ATTGGCCAGA AAAAGCCATC
GTCTTCTCCA ACACTAAACA CAGTTGTGAA AACCTTTGGT CTTGGCTTGA AGGGGACGGT
CACAGGGTGG GTTTACTTAC CGGTGATGTG CCACAGAAAA AGCGAATTCG CATTCTTGAG
CAGTTTACCA GTGGTGATCT AGACGTGTTG GTCGCTACCG ACGTGGCGGC CCGTGGGTTA
CACATTTCTG ATGTATCTCA CGTGTACAAC TATGACTTAC CGGATGATTG TGAAGATTAC
GTTCACCGCA TTGGTCGTAC GGGGCGCGCG GGCAACAAAG GTGTCTCTGT GAGTTTTGCC
TGTGAAACCT ACGCCCTTAA TTTGCCGGCG ATTGAACAAT ACATAGGTCA TTCAGTGCCT
GTCAGTCGTT ATGACAGAGA AGCCTTATTG GATGACATTC CAACGCCAGT CAAAATTCAT
CGTAAACACC CAACGAGTCG TACACGAGAT GGCGCTAAAG GTGCCCATAG AAGTGGTGGT
GCACGTCCAC CGCGTCACAG GACCCGAAGA CCATCTTAG
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| Protein sequence | MSETHLSTQR FADLPLHAEV IQALNENGFE FCTPIQALSL PVLLKAKDIA GQAQTGTGKT
MAFLVATFNH LLTTPAPQAR ELNQPRAIIM APTRELAIQI AKDANLLAKH TGLKVGIVYG
GESYEVQREV LDKGVDILIG TTGRIIDYVR QGVISLNSIQ AVVLDEADRM FDLGFIKDIR
FLFRRMPDAS SRLNMLFSAT LSMKVQELAY DHMNDPEKVE VTPEEKTSKN IKEEIFYPST
EDKMRLLLTL MEEDWPEKAI VFSNTKHSCE NLWSWLEGDG HRVGLLTGDV PQKKRIRILE
QFTSGDLDVL VATDVAARGL HISDVSHVYN YDLPDDCEDY VHRIGRTGRA GNKGVSVSFA
CETYALNLPA IEQYIGHSVP VSRYDREALL DDIPTPVKIH RKHPTSRTRD GAKGAHRSGG
ARPPRHRTRR PS
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