| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0387 |
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| Symbol | |
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| ID | 4017521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 455744 |
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| End bp | 456460 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637954372 |
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| Product | uroporphyrinogen III synthase HEM4 |
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| Protein accession | YP_561405 |
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| Protein GI | 91791754 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.999258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAT TACTTACTCG CCCTGAAGGG CGCAATCAAC AGATGGCCGA TGCACTGACT
CAACTTGGCA TCGGCTACCA CTTGTGTCCT TTACTTGAAA TAACCCCATC GAACACCCCA
CCTAAAGCCA GTTTTTTTAG CGCTGATAAA CTGGTGTTTA TCAGTGCCAA CGCGGTGTAT
TTCGCTGCCA ACAATTTGAA CAATCACTTT CCTATGCACT GTGAGTACTT TGCTGTGGGC
GAGGCGACTC AGATGGCGCT AGCTGAATAT CAAGTAGTAA GCCAAAGCGC GCCCAGCTCG
CAACAAGACA GCGAAGGACT CTTGTCACTT TCCCAGCTGC AAGATGTGGA GTTGCAAAAA
ATAACGATTG TGAGGGGCGA AGGCGGCAGA GAAACGTTAG CGCAAACCTT GTCTGAACGG
GGGGCAAATG TCGACTATTG GCAAGTATAC CAACGTAGTA AGCCAGCACT CGATCCCAAG
TCAGTTTGTC AGCAATGGCA AGACCTAGGA ATAGACACGT TAGTGCTCAC CAGTGGCGAA
GCCTTAGCAA ATTTAATGGA ACTTGTGCCG AAAGAGCTAT TTGCATGGCT GCGCTCATGT
CATATGATAG TCCCAAGTCA CCGTGTTCAA GTTCAGGCTA TATCCCAAGG GTTTCATCGT
GTTAGCAATG CGAATGGAGC AAGTACTCAA GCCATACTCA CTGCATTGGC GCTTTAA
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| Protein sequence | MKVLLTRPEG RNQQMADALT QLGIGYHLCP LLEITPSNTP PKASFFSADK LVFISANAVY
FAANNLNNHF PMHCEYFAVG EATQMALAEY QVVSQSAPSS QQDSEGLLSL SQLQDVELQK
ITIVRGEGGR ETLAQTLSER GANVDYWQVY QRSKPALDPK SVCQQWQDLG IDTLVLTSGE
ALANLMELVP KELFAWLRSC HMIVPSHRVQ VQAISQGFHR VSNANGASTQ AILTALAL
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