Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0368 |
Symbol | |
ID | 4016694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 418272 |
End bp | 420098 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637954353 |
Product | potassium efflux system protein |
Protein accession | YP_561386 |
Protein GI | 91791735 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGTTAG AAATGGCGGT AATTTATCTC GCGGCGGCCA TAGTCGCAGT CCCAGTAGCT AAACGATTAG GCTTAGGTTC TGTCCTTGGC TACTTGTTAG CTGGGATCCT CATCGGTCCT TTCCTGTTAG GCTTGGTAGG TGAACAGACA GATGTGATGC ACTTTGCCGA ATTTGGCGTG GTGATGATGC TATTTTTAGT GGGCCTTGAA CTGCAACCTT CAAGACTCTG GAAGCTGAGG CATTCCATCA TAGGGCTAGG TGGCTTGCAG GTGCTACTCA GCGCTGGATT AATATTCGCC ATCGGGTTTT ATTTGTTTGA GCTTCAATGG CAAACTGCGC TGGCCATAGG GCTGATGTTG TCGCTGTCAT CCACTGCCAT AGTGTTACAA ACTTTGACCG AGAAAGGCTG GATAAAACAA GATGCGGGGC AAAATGCCTT CTCAGTCTTG TTATTTCAAG ACATCGCAGT GATCCCCATT TTAGCCTTGA TCCCCCTATT GGCGTTCACC GATATCAATG CCGCCCAAGC CGATCATGGC AATATGATAG CCCACCTCCC AAGCTACCTG CAGGTGATGA TTTCTTTGGG GGTCATCGGC ACTATTATTC TCGCTGGCCG GTATGTGAGT GCACCTTTGT TTCGCTATAT TGCCGAGACT CACCTGAGGG AGATTTTCAC TATTTCAGCC CTGTTCTTAG TGGTGGCGAT TGCGGTTATC ATGCAAAAAA TTGGATTGTC GCCAGCGCTT GGAACCTTTC TTGCTGGTGT GGTATTGGCC GAAAGCGAAT TTCGCCACGA ATTAGAAGTG GATATTGAAC CCTTTAAAGG CTTGCTGCTA GGGTTGTTTT TTATCACAGT CGGCGCCTCG ATTGACTTCC CGTTACTGTT AGAACAGTCC TTGTTGGTCC TCGGATTAGT GTTAGGTTTA TTGCTGGTTA AAGCGCTAGT GTTATTTGTG TTGGCACAGG GATTTAAGAT GCAAGGCGAG CAGAAGTTAC TGTTTACTTT AGCGTTAGCT CAGGGGGGGG AGTTTGCCTT TGTGCTCTTG TCCTTGACGC AAAACTTAGA GATTTTAACC TTAGAGCAAA CCAAAGTCGT GACCTTAGTG GTCACCATAT CCATGTTGTG CGCCCCCTTA TTGCTGATGT TTTATGAGCG TTTGTTAGTA AAGAAAACAC CGGAAAATCC TGAGTATGAC AATGAAATTG AAGCGACAAA CAGTGTCATT ATTGCTGGCT ACGGCCGCTT TGGCCAAGTG GTGGGGCGCC TGTTATCGGC TCAGGGGTAT CATCTCTCTA TTTTAGATCA CAGCCCCAGT CAAATTGACA TGTTGCGCCG CTTTGGTAAT AAGGTTTTTT ATGGCGATGC GGCTAGAAAA GACTTGCTGG AAGCCGCTGG GGCTAAAGAT GCTCAACTAT TAGTGATTGC CATAGATGCA CCCGATAAAG CACTGGAAAT CGTCGAGCTT GCCCACAAAC ACTACCCTCA ACTTAAGATA GTCGCCCGGG CTATCGACAG GCGACACGCC TATCAATACC TGCGCTTAGG CGTGACCAGC TTTAAGCGTG AAACGTTCGA CTCTGCGGTG AATCTTGGCA TCGAAGCCTT AACCTTGCTA GGGAACTCAA GCACAGTGGC AGAGCGCGCT GGCGATCTCT TTAGTCAGCA TGATAATGCC TCTTTGCATG AGCTTGCCGC CCTGTGGGGA GACGATCATA CCTATGGTGT GGCAGTGCGT CAGCGGATGG AAGACTTAAA ACAAGTGCTG GCGAAAGACA AGGCGGCCCA AGAGCGACTC AATACCTGTA AAGGCGGCGA CTGCTAA
|
Protein sequence | MMLEMAVIYL AAAIVAVPVA KRLGLGSVLG YLLAGILIGP FLLGLVGEQT DVMHFAEFGV VMMLFLVGLE LQPSRLWKLR HSIIGLGGLQ VLLSAGLIFA IGFYLFELQW QTALAIGLML SLSSTAIVLQ TLTEKGWIKQ DAGQNAFSVL LFQDIAVIPI LALIPLLAFT DINAAQADHG NMIAHLPSYL QVMISLGVIG TIILAGRYVS APLFRYIAET HLREIFTISA LFLVVAIAVI MQKIGLSPAL GTFLAGVVLA ESEFRHELEV DIEPFKGLLL GLFFITVGAS IDFPLLLEQS LLVLGLVLGL LLVKALVLFV LAQGFKMQGE QKLLFTLALA QGGEFAFVLL SLTQNLEILT LEQTKVVTLV VTISMLCAPL LLMFYERLLV KKTPENPEYD NEIEATNSVI IAGYGRFGQV VGRLLSAQGY HLSILDHSPS QIDMLRRFGN KVFYGDAARK DLLEAAGAKD AQLLVIAIDA PDKALEIVEL AHKHYPQLKI VARAIDRRHA YQYLRLGVTS FKRETFDSAV NLGIEALTLL GNSSTVAERA GDLFSQHDNA SLHELAALWG DDHTYGVAVR QRMEDLKQVL AKDKAAQERL NTCKGGDC
|
| |