| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0342 |
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| Symbol | |
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| ID | 4020358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 382390 |
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| End bp | 383883 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954323 |
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| Product | glycerol kinase |
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| Protein accession | YP_561360 |
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| Protein GI | 91791709 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0554] Glycerol kinase |
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| TIGRFAM ID | [TIGR01311] glycerol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00293212 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAA AAAGCACACC AACTAAGTTT ATTGTCGCCT TAGATCAAGG TACTACCAGC
TCAAGGGCGA TAGTGTTTGA TCATAAAGCC AATATTGTCG CTACCGCTCA ACGTGAGTTT
ACTCAGCGTT ATCCTCAAGC AGGATGGGTC GAACATGACC CCATGGAAAT CTGGTCTTCT
CAAAGTTCAT CTTTAATCGA AGTGTTGGCC CGAGCCGGCA TTGAAAGCCA AGATGTTGCT
GCAATAGGTA TCACAAATCA GCGTGAAACC ACAGTGATTT GGAATAAGCG CAGCGGTAAA
CCTATTTATA ACGCAATCGT GTGGCAATGT CGTCGCAGTC AGGGTATTTG CCAACAACTC
AAAGCTCAAG GCCTTGAAAC CATGATAAGT CAGAAGACTG GCTTAGTGTT AGATCCCTAT
TTTTCGGCCA GTAAAATTAA ATGGATTTTG GATACTGTGC CAGGAGCCCG TACCCAAGCT
GAGGCGGGTG AACTGCTATT TGGTACCATT GACACTTGGC TGGTCTGGAA ACTGACCCAT
GGGGCTGTGC ATGTCACCGA GCCCACCAAC GCCTCCCGTA CCATGCTGTT TAATATTCAT
AGTCAAAGCT GGGATCCAGA ATTACTGCAA GCCTTCGATA TTCCTCCTTC TTTGTTGCCG
CAAGTTAAGC CTTCCTGCGC CGTATATGGC CATACTGACA TCGTCGGTGG CCAGATTGCT
ATCGCGGGTA TGGCAGGGGA TCAACAAGCG GCGCTGTTTG GTCAACTATG TGTCGAACAA
GGCATGGTGA AAAACACCTA CGGTACTGGC TGTTTCCTGT TGATGAATAC CGGCGAACAG
GCGGTAACCT CTCAACATGG GCTACTGACT ACCGTCGCCA TCGGGCCGCA AACGCAGGTA
AATTACGCCT TGGAAGGGGC GGTATTTATG GGCGGCGCGG TTATTCAGTG GCTTAGGGAT
GAAATGGCCA TGATTGAACA TGCCAGAGAC AGCCAAGCAT TAGCAACACA AGTAGCAGAC
ACTAATGGGG TCTATTTAGT GCCTGCGTTT GTGGGACTCG GCGCCCCTTA TTGGGATGCT
GACGCAAGAG GCGCTTTGGT GGGCCTGACT CGTGGTGCTA ATCGTAAACA CATAGTGCGC
GCCGCGTTAG AAGCTATCGC CTACCAGAGC CGTGATGTGC TCGATGCCAT GGTGAAGGAC
TCAGGGGGTG ATATTAAACA CATTCGGGTA GATGGCGGCG CGGTCGAAAA TGATTTCTTG
ATGCAGTTTC AAGCTGATAT TACCGATGTT GCAGTGATAA GACCGAAAAA CATTGAGACC
ACTGCTATGG GGGCGGCGTT TCTTGCCGGG TTAGCAGTTG GGGTATGGGC CTCTATTGAA
GAGCTGCACA ATATCACCAC TATAGATAAG ACATTTAATG CCAATATGAC AGAACTGGAG
CGAGATAGTC GTTATCTGGG TTGGAAAAAT GCCGTTAAGC AAGTCATGAC CTAA
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| Protein sequence | MAEKSTPTKF IVALDQGTTS SRAIVFDHKA NIVATAQREF TQRYPQAGWV EHDPMEIWSS
QSSSLIEVLA RAGIESQDVA AIGITNQRET TVIWNKRSGK PIYNAIVWQC RRSQGICQQL
KAQGLETMIS QKTGLVLDPY FSASKIKWIL DTVPGARTQA EAGELLFGTI DTWLVWKLTH
GAVHVTEPTN ASRTMLFNIH SQSWDPELLQ AFDIPPSLLP QVKPSCAVYG HTDIVGGQIA
IAGMAGDQQA ALFGQLCVEQ GMVKNTYGTG CFLLMNTGEQ AVTSQHGLLT TVAIGPQTQV
NYALEGAVFM GGAVIQWLRD EMAMIEHARD SQALATQVAD TNGVYLVPAF VGLGAPYWDA
DARGALVGLT RGANRKHIVR AALEAIAYQS RDVLDAMVKD SGGDIKHIRV DGGAVENDFL
MQFQADITDV AVIRPKNIET TAMGAAFLAG LAVGVWASIE ELHNITTIDK TFNANMTELE
RDSRYLGWKN AVKQVMT
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