| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0340 |
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| Symbol | |
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| ID | 4020356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 380353 |
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| End bp | 381705 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954321 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_561358 |
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| Protein GI | 91791707 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000312339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CCGTGTTAAC CTTGGCCATC AGTGCCTTAG TCGTAGGTTC AACTGCGCCA
GTGAATGCCG CAGGTTTCCA GCTGGCTGAA TACTCTGCCA CAGGTCAAGG CCGAGCCTTT
GCTGGCGAAG CCGCTATGGC TGACAATGCC TCAACTCAAG CGCGTAACCC TGCCATGTTA
AGTTACCTTG AAGGCCAGCA AGTCTCCTTG GGTGGTATTT ACGTGATGAC GAATGTTGAC
GTAGATGGTG ATGTCTCCCT ACGCTCACCC TTATTTGGTT CGGCTGAAGT GGTGATCCCT
GCCGATGGAA AAGACGTTGC CGCCAGTGCG TTAGTTCCTA ATTTTTACTA CGCTAATCCA
CTAAATGAAG ATTGGACTCT GGGCCTTGGG GTGAATTCCA ACTATGGATT AGCCACAGAA
GTGCCCGCGG ATCACGCGGC CGCCATCTTT GGTAGTCACA CTTCGGTGAA AACAGTCGAA
TTCAATCCCA ATCTTGCTTA CCGCGTAAAT GATGCGTTCA CTTTAGGTGC AGGCGCGCGC
TTGGTGTATG GCGAAGGTGA AATATCAGCA AGCACCCCTG CTTGGATTAG CGCTATAGGC
AGTCATCCCA ATGTCCCTGC TAGCATTGCA GCACGTCTGC CGTCAGCAGG TACTCAGCTT
AAGTCTATGC AAGGTGATGA CATAGGTTAT GGCTGGACGT TAGGTTCAAG CTGGCAGATT
AACCCAAGTC ACAGACTCGG CTTGGCTTAT CACAGCGGAG TGGAGCTTGA GCTTGCAGGT
TCTGCGGCAG GGTTAAGCTA TACTGGTGGC CAAGATGTGG CTATAGAAGG TTATTTACCC
CTTGAACTGC CCGCTTTTGC AGAACTTGCC TCTTACCATG AGCTGACAGA GAAGCTTGCC
ATTCATACCA GTGTGAACTG GACTCAGTGG AGTGTATTTG AGCGTTTAGT GGCACATTTC
CCAGGTGATG TGAAGCCTGT GGGCAACCTT GAGACAGATC TGGTTAAAGA AGAAAACTTC
AAAGATAACT GGCGCTTTGC CTTAGGTTCA AGCTATCAAG CGAGCAATGC TTTGTTAGTT
CGTGCGGGTG TAGCCTTGGA TAAAACCGCT GTGGATGACG CCCATAGAAC CACCACCATT
CCCGATTCAG ACCGCCTATG GTTAAGTACT GGTGCGGCTT ATCAAGTCTC AAAAAATCTA
ATGATTGATT TTGCTGTGAC TTATATTCGT TCTATCGGTG ATGCGCCAAT CAGCGAGAGC
CAGAACTTAT TGGGCCTGGC AGAAATTGGC TTTAATGGTG AAGCCAGTGG CGATGTGTGG
CTAGTAGGTA GCCAGTTGAG CTATACGTTT TAA
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| Protein sequence | MKKTVLTLAI SALVVGSTAP VNAAGFQLAE YSATGQGRAF AGEAAMADNA STQARNPAML
SYLEGQQVSL GGIYVMTNVD VDGDVSLRSP LFGSAEVVIP ADGKDVAASA LVPNFYYANP
LNEDWTLGLG VNSNYGLATE VPADHAAAIF GSHTSVKTVE FNPNLAYRVN DAFTLGAGAR
LVYGEGEISA STPAWISAIG SHPNVPASIA ARLPSAGTQL KSMQGDDIGY GWTLGSSWQI
NPSHRLGLAY HSGVELELAG SAAGLSYTGG QDVAIEGYLP LELPAFAELA SYHELTEKLA
IHTSVNWTQW SVFERLVAHF PGDVKPVGNL ETDLVKEENF KDNWRFALGS SYQASNALLV
RAGVALDKTA VDDAHRTTTI PDSDRLWLST GAAYQVSKNL MIDFAVTYIR SIGDAPISES
QNLLGLAEIG FNGEASGDVW LVGSQLSYTF
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