| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0335 |
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| Symbol | |
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| ID | 4020351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 374894 |
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| End bp | 375988 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954316 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_561353 |
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| Protein GI | 91791702 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTATC AAATAGCAGT GTTAGCAGGG GACGGTATTG GCCCAGAGGT GATGACAGAG
GCCCGCAAAG TGCTCAAGGA AGTTGAGCAA CGTTTTGGCT TAAGCATCGA ATACAGCGAA
TATGATGTGG GCGGTATCGC CATAGATAAT CATGGCAGCC CCTTGCCTGA ACACACTATT
AAGGGCTGTG AGGCGGCAGA TGCGATTCTT TTTGGTAGTG TCGGCGGGCC TAAATGGGAG
CATTTAGCCC CAGATAGCCA ACCAGAGCGC GGTGCTTTAC TGCCACTACG GGCCCATTTT
GAACTGTTTT GTAATTTACG TCCGGCTAAG TTGCATCAAG GCCTGGAGCA TATGTCGCCC
CTAAGGAGTG ATATCTCAGC TCGGGGATTC GATGTCTTGT GCGTGCGAGA ACTCACCGGC
GGAATTTACT TTGGCAAACC TAAAGGTCGC CAAGGAGAAG GTGAGTCAGA AGAAGCCTTC
GATACCATGC GCTATAGCCG GAAAGAAATC CGCCGTATTG CCCAGATTGC CTTCGAGGCG
GCCCGTGGCC GCAAGCAAAA AGTCACTTCG GTAGATAAAG CTAACGTGCT GGCTTGCTCA
GTATTATGGC GTCAAGTGGT TGAAGAAGTG GCAGTGAATT ATCCTGATGT CACCTTGGAA
CACATCTATA TCGATAATGC CACTATGCAG CTACTGCGCC GCCCCAATGA GTTTGATGTC
ATGCTGTGTT CAAACTTATT TGGCGATATT TTATCCGATG AAATTGCCAT GCTAACTGGC
TCTATGGGCT TGTTGTCATC GGCGAGCATG AATGGCACAG GCTTTGGCTT GTATGAACCA
GCGGGTGGCA GTGCCCCAGA TATAGCAGGC CAAGGAGTTG CTAACCCTGT TGCACAAATT
TTATCGGCAG CGTTGATGTT GCGTCACAGT TTAAAACAAG AGGAAGCGGC CAGCGCCATC
GAGCGCGGTG TAGCCAAAGC CTTAGAGGCA GGTTATTTAA CCGCTGAGTT ATTGAGCGCG
GATGAGCGCA GCCAAGCAAA GTCGACAACT CAGATGGGCG ACTATATTGC CGCAGCAATA
CGGGAAGGTG TGTAA
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| Protein sequence | MSYQIAVLAG DGIGPEVMTE ARKVLKEVEQ RFGLSIEYSE YDVGGIAIDN HGSPLPEHTI
KGCEAADAIL FGSVGGPKWE HLAPDSQPER GALLPLRAHF ELFCNLRPAK LHQGLEHMSP
LRSDISARGF DVLCVRELTG GIYFGKPKGR QGEGESEEAF DTMRYSRKEI RRIAQIAFEA
ARGRKQKVTS VDKANVLACS VLWRQVVEEV AVNYPDVTLE HIYIDNATMQ LLRRPNEFDV
MLCSNLFGDI LSDEIAMLTG SMGLLSSASM NGTGFGLYEP AGGSAPDIAG QGVANPVAQI
LSAALMLRHS LKQEEAASAI ERGVAKALEA GYLTAELLSA DERSQAKSTT QMGDYIAAAI
REGV
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