Gene Sden_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0318 
Symbol 
ID4020431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp356660 
End bp357523 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content51% 
IMG OID637954299 
Producthypothetical protein 
Protein accessionYP_561336 
Protein GI91791685 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCAAA GTATGACAGC TTATGCTCGT ATCGAGCACA AAGCCCAATG GGGCACGGCC 
TCATGGGAAA TTCGTTCAGT CAACCAGCGC TACCTAGAAA CTTATCTGCG CCTCCCTGAG
CAATTTAGAA GCTTTGAGCC TGTCCTTAGG GATCGTCTGC GTAAACGCCT CAATCGCGGT
AAAATCGAAG TCAATCTACG TTATGATTTA ACCGACAACT CCAGCAATGA GTTGCAACTG
AATCAACCGC TCGCCAAGCA GCTGCTTAAT GCCGCCAACT GGTTAAAACA GGAAGCCGGT
CAAGGGGACG TGAGCCTCAC CGACATTTTG CGTTGGCCCG GGGTACTCGC CAGTGCCGAG
CAAGACATGG ATGCCATAGG GGCAGAACTC ATGACAGCCT TTGACTCTGC CATAGATCAA
TTCATCGAAG CTCGCGGACG TGAAGGCGCT GCCATAAAAG ACATGCTACT TAGCCGTTTA
GATGGCGTCA CAGAACAAAT CGCCGCCGTA CGCACTCACA TGCCAATGGT AATGCAATAC
CAGCGTGACA AGCTCACCAA CCGGTTAGCC GAAATTAGCG GTGAGCTAGA CCCCGCCCGC
ATCGAGCAAG AAATGGTGCT ACTGGCACAA AAGCAAGACG TCGCCGAAGA AATGGACAGA
CTCGAAGCTC ACGTGGTTGA AGCCCGCCGT ATCCTCAAGA AAGGCGGCAG CGAAGGTCGC
CGTTTAGATT TTATGATGCA AGAATTCAAC CGTGAATCTA ACACCTTAGC CTCAAAATCC
ATCAGCGCAG AAATCACCGC CGCCGCGGTA GAGCTTAAAG TGCTAATCGA GCAAATGAGG
GAACAAATAC AAAATGTTGA GTAA
 
Protein sequence
MIQSMTAYAR IEHKAQWGTA SWEIRSVNQR YLETYLRLPE QFRSFEPVLR DRLRKRLNRG 
KIEVNLRYDL TDNSSNELQL NQPLAKQLLN AANWLKQEAG QGDVSLTDIL RWPGVLASAE
QDMDAIGAEL MTAFDSAIDQ FIEARGREGA AIKDMLLSRL DGVTEQIAAV RTHMPMVMQY
QRDKLTNRLA EISGELDPAR IEQEMVLLAQ KQDVAEEMDR LEAHVVEARR ILKKGGSEGR
RLDFMMQEFN RESNTLASKS ISAEITAAAV ELKVLIEQMR EQIQNVE