Gene Sden_0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0297 
Symbol 
ID4019801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp330281 
End bp330883 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content36% 
IMG OID637954278 
Producthypothetical protein 
Protein accessionYP_561315 
Protein GI91791664 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATATGTC GACGGAATCG ACACAGAAAA AAGTTATGTC GAAAAAACAA CAAAAAATCG 
ACATATCAAT TTGAAGCCAT ACACCCTTTT TATGACGGAA ATGGCCGAAC GGGTCGTATT 
TTAAACGTTT TGTACCTTAT TGAATCTGGT CTTTTAACGC TACCTATTTT GTACTTAAGT 
CGTTTCATCG TTCATAACAA ACAAGACTAT TATCGCCTTT TGAACCAAGT AACCAAAGCT 
CAAAATTGGG AAGAGTGGCT GTTATTTATG CTAAAAGGTG TCGAGCAAAC TGCTATATGG 
ACCTGTGAAA AAATCACAAC GATTAGAGCA CTTATGGAAA GTACAACAGA TCACATAAAA 
GCACAGCTAC CCAAAATATA TAGCCATGAG CTTGTTCAGC TTATTTTTGA ACAACCCTAT 
TGCCGTATCA GCAACCTAGT TGAACGTGAT ATTGCAAAAC GCCAAACTGC TTCAAGCTAT 
TTAAAGCAAT TAACTGATAT TGGTGTGCTG CAAGAAATCG ACTCAGGAAA GGAAAAATTA 
TTTGTACATC CACGCTTGAT GAAGCTAATG ACAAAAGACA GTAATAGTAT TAATGCTTTT 
TGA
 
Protein sequence
MICRRNRHRK KLCRKNNKKS TYQFEAIHPF YDGNGRTGRI LNVLYLIESG LLTLPILYLS 
RFIVHNKQDY YRLLNQVTKA QNWEEWLLFM LKGVEQTAIW TCEKITTIRA LMESTTDHIK 
AQLPKIYSHE LVQLIFEQPY CRISNLVERD IAKRQTASSY LKQLTDIGVL QEIDSGKEKL 
FVHPRLMKLM TKDSNSINAF