| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0232 |
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| Symbol | |
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| ID | 4017952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 258675 |
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| End bp | 259508 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637954208 |
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| Product | glutamate racemase |
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| Protein accession | YP_561252 |
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| Protein GI | 91791601 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0796] Glutamate racemase |
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| TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000508837 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCAGGTC CAATTTTAGT ATTCGATTCA GGTATAGGCG GTTTGTCTGT ACTGGCAGAA
ATTCGCAAGC GACTGCCGGC AGAGAATTAC TGCTACTTAT TTGATAATGC ACGCTTACCC
TATGGCGATT TATCCGAGTC AGAACTCATC CGCGGTTGTG TTGAGCTTAT CTGTCAGCAA
GTACAGCAAG TTGAAGCTAA GATCGTGGTT GTTGCATGTA ATACCGCCAG CACCTTAGTG
CTACCGGTGC TGCGCCAAAG ACTCACAATA CCTGTAGTGG GAGTAGTTCC TGCTATTAAG
CCCGCTGCAC TTCTCTCAAA GCGTAAACAT ATTGGTGTTT TGGCGACGCC AGGCACTGTC
AGCCGAGATT ATACCCATGG CTTGATCAGT CAGTTTGCTG AAGATTGTCA GGTGGATTTA
TTTGGCTCAT CAGAACTTGT TATGTTGGCG GAGCAAAAAG CGGCCAAGCT GCCTGTCAAT
AATCAGCAAT TAGCCAAGAT ACTGGCACCG ATTAAAGCTT CAAAGCTCGA TGTGCTTGTC
TTAGGTTGCA CACATTTTCC TATGATAAAA GAGGAATTGA GTCAATATCT TGGAGAAAGT
GTACTGTTAC TGGATTCAGG TGAAGCCATA GCAAACCGAG TCGCAAGCTT ATTAGAACCC
GCAGCTTTGT CTGAAGCTTT GCATAGTGGG ACTACTTTGC ATGGTGGAGC TAATAGTGGA
ACAAAAGGCA TAGGAGTTAT ACACGCCGCT TATACCCAAG CAATAACAGC AGGCCTTAAC
ATCACCTTAC AAGAGTACGG CATCAGCGAT AGCAGTTTAA TTGTCACTAA ATAG
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| Protein sequence | MSGPILVFDS GIGGLSVLAE IRKRLPAENY CYLFDNARLP YGDLSESELI RGCVELICQQ
VQQVEAKIVV VACNTASTLV LPVLRQRLTI PVVGVVPAIK PAALLSKRKH IGVLATPGTV
SRDYTHGLIS QFAEDCQVDL FGSSELVMLA EQKAAKLPVN NQQLAKILAP IKASKLDVLV
LGCTHFPMIK EELSQYLGES VLLLDSGEAI ANRVASLLEP AALSEALHSG TTLHGGANSG
TKGIGVIHAA YTQAITAGLN ITLQEYGISD SSLIVTK
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