| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0227 |
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| Symbol | |
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| ID | 4017947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 253148 |
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| End bp | 254251 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637954203 |
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| Product | tRNA 2-selenouridine synthase |
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| Protein accession | YP_561247 |
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| Protein GI | 91791596 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2603] Predicted ATPase |
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| TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.254912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCGCC AGATAATTCC AAGTTCAGAA TTTGCTAGCC TATTTCTCCA GGCTCGGCCG
CTCATCGATG TACGCGCTCC GATAGAATTT ACCAAGGGCG CCTTCCCTAG TGCGATTAAT
TTACCCTTGA TGAAAGACAG TGAGCGTGAA AAAGTGGGCA CTTGTTATAA GCAGCAGGGT
CAAGAGTCAG CGATTAAACT GGGTCATGCC TTAGTTAGTG GCACGGTCAA AGAGCAGCGC
ATCGCCGCAT GGCGTAAGGC AATTGAAGCG AACCCCAGCA GTTATTTATA TTGTTTTCGC
GGCGGCTTAC GCTCTCAGTT AAGCCAGCAA TGGATTAAGG AGGCGGGTTT TGACATCCCT
TATATACAGG GCGGTTATAA GGCGTTAAGG ACATTTTTAA TTCAGATCTT AGAGTCCAGC
GCTGCACTTA ATTCTATGCT CATTCTTAGT GGCAGAACCG GTAGCGGTAA GACTGACTTT
CTGCAGCTTA GGGACGAAGC CGTTGACCTA GAGCAATTGG CAAATCACAG AGGATCTAGT
TTTGGTAAAA ACCTTGACCC ACAGCCTAGC CAAATTAACT TTGAAAACCA ACTGGCTATC
GCAGTGTTGC AGCATCAAAC TAAGCATCAT AGGCACTTGT TACTTGAAGA TGAGAGCTTT
TTGATTGGCC GCTCAGCCTT ACCTAAAGCC TTTTACAACT CGATGCAACA TGCTGACATA
GTGTTATTAG AAGAAGATGA CGAGCAGCGC TTACAACGTT TATTATTCGA TTATGTGGAC
AACAAACTAG CAAGCTTTGT GAGTCGATTA GGTGACGAAG CGGGTTTAAA GGCCTTTGGT
GATTACCTAA ATGCTAGCCT CAATGGTATA AAAAAACGCT TAGGTGGCAA ATTTCTACAG
GAACTATTGG ACTCAGTAGC CCGCGCCTTA GCACATCAAA TCAGTCAAAA TGATACTAGT
CTGCACCTAG ACTGGATCTC ACAGTTGCTC ACTCGCTATT ACGACCCCAT GTATGACTAT
CAACTATCCC AAAAACAGCA AAGGGTGTTG TTTAAGGGCG ACCATGCCAG CATGCATGCT
TGGTTAGATG AACTAAGAAA ATAA
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| Protein sequence | MTRQIIPSSE FASLFLQARP LIDVRAPIEF TKGAFPSAIN LPLMKDSERE KVGTCYKQQG
QESAIKLGHA LVSGTVKEQR IAAWRKAIEA NPSSYLYCFR GGLRSQLSQQ WIKEAGFDIP
YIQGGYKALR TFLIQILESS AALNSMLILS GRTGSGKTDF LQLRDEAVDL EQLANHRGSS
FGKNLDPQPS QINFENQLAI AVLQHQTKHH RHLLLEDESF LIGRSALPKA FYNSMQHADI
VLLEEDDEQR LQRLLFDYVD NKLASFVSRL GDEAGLKAFG DYLNASLNGI KKRLGGKFLQ
ELLDSVARAL AHQISQNDTS LHLDWISQLL TRYYDPMYDY QLSQKQQRVL FKGDHASMHA
WLDELRK
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