Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0225 |
Symbol | |
ID | 4017945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 250894 |
End bp | 251703 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637954201 |
Product | 3'(2'),5'-bisphosphate nucleotidase |
Protein accession | YP_561245 |
Protein GI | 91791594 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.453654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCAG AAGACATCAT TGAAGCCGTG ATCAAGATTG CCCAAATGGG TGGCATTGCT ATCCGTAATA TTTTTTTACA GGGCGAGTAT GATCGTGAAT TGAAGTCTGA TAACACGCCT GTGACATCGG CAGATTTAGC GTCGAATGAA ATAATTTGCC AGCAATTGGC ATTATTGACG CCAGACATTC CTATTCTGAG TGAAGAGGCG GCAGATATTC CTTTGAGTGT GCGTAGTCAA TGGCAGCGTT ATTGGCTGGT TGACCCTCTC GATGGCACTG GTGAGTTTAT TGCTGGCAGT GATGATTTCT CGGTAATAAT CGCCTTGGTC GAGAATAATC GCCCAGTTAT GGGGGTGGTG TATGCGCCCA TGACACAAAC TTGCTATTAC GCCATGATTG GGAAAGGCGC CTTCAAACGT GACCATGAGG GTGAAAGGCA GATCCACAGT AAAGCGCTGA CATCCTTTCA AAGTGATAGG CTGCGTTTTG CTGTTAGTCG TAGGCAAGAT CCCTTCTCAG TGTTGAATTT GTTTGACTCT CAAGCCGATG CAGAACTGGT TATCATGGGC GGTGCAGCCC TTAAAAGTTG CCTAGTGGCG GAAGGGAAAG CAGATTGCTA TGTGCGTTTG GGACCCACGG GTGAATGGGA TACAGGCGCT GCGCAGATCA TTATTCAAGA AGCCGGCGGC AATTTAATGG ATTTAACCCA GCAGCCATTA AGCTATAACC TACGTGAATC ATTAGAAAAC CCTAACTTCA TGGTGGTGGG CAGTCCTCAA CTTGGTTGGG GAGAGTTGTT TAAAATATAA
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Protein sequence | MKPEDIIEAV IKIAQMGGIA IRNIFLQGEY DRELKSDNTP VTSADLASNE IICQQLALLT PDIPILSEEA ADIPLSVRSQ WQRYWLVDPL DGTGEFIAGS DDFSVIIALV ENNRPVMGVV YAPMTQTCYY AMIGKGAFKR DHEGERQIHS KALTSFQSDR LRFAVSRRQD PFSVLNLFDS QADAELVIMG GAALKSCLVA EGKADCYVRL GPTGEWDTGA AQIIIQEAGG NLMDLTQQPL SYNLRESLEN PNFMVVGSPQ LGWGELFKI
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