| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0210 |
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| Symbol | |
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| ID | 4017930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 229919 |
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| End bp | 230734 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954186 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_561230 |
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| Protein GI | 91791579 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGAAC TCCCGGAAGT TGAAGTCACT CGTCAAGGTA TAGCCCCTTA CCTTGTTGAT
CAAACCGTCG TAGAGCTTAT TGTCCGCAAC GCTTCTTTGC GTTGGCCGGT GCCAGATCTT
GCTCACAATA TTGTCGGCCA AACCATACTC AGTGTCAGGC GCAGAGCCAA ATACTTGCTG
ATAGATACCG AGGCTGGGAT AACCATAGTG CACTTAGGCA TGTCCGGCAG TTTGCGCATT
CTGCCAAGAA ACACCCCGGT TGAGAAGCAC GATCATATTG ACTTAGTGTT AGCCAATGGC
CGCATGCTGC GCTTTAATGA CCCTAGGCGT TTTGGTGCCT GGCTTTGGTA TGAACTCCCT
GAAGAAGCTC ACCCCTTACT GGCAAAGCTC GGCCCTGAGC CACTAAGCGA GGCTTTTAAT
CCACTGCAGT TGCTAACAGC CCTAAAAGGC AAGAAGAAAG CCATTAAACT TTGCCTGATG
GATAACCATA TTGTAGTGGG CGTCGGTAAT ATTTATGCCA ATGAAGCCTT GTTTGCAGCT
GGCATACATC CTGAATCCGA AGCGGGAAAA ATAGATATTG AAAAGCTGAC GCTACTGGTG
GTTGAGGTAA AACAAATTCT GGCTCAGGCC ATCAAGCAAG GCGGCACCAC CTTGAAGGAT
TTTACTAATG CTGATGGCAA ACCCGGCTAC TTTGCCCAAA AACTGCATGT CTACGGTCGA
GGAAGTAAAA GCTGCACTCA TTGTGGCAAC CTGCTCAGTG AAATTCGCCT TGGCCAACGC
ACCACAGTCT TTTGCGGCCT GTGCCAAACA AAATAG
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| Protein sequence | MPELPEVEVT RQGIAPYLVD QTVVELIVRN ASLRWPVPDL AHNIVGQTIL SVRRRAKYLL
IDTEAGITIV HLGMSGSLRI LPRNTPVEKH DHIDLVLANG RMLRFNDPRR FGAWLWYELP
EEAHPLLAKL GPEPLSEAFN PLQLLTALKG KKKAIKLCLM DNHIVVGVGN IYANEALFAA
GIHPESEAGK IDIEKLTLLV VEVKQILAQA IKQGGTTLKD FTNADGKPGY FAQKLHVYGR
GSKSCTHCGN LLSEIRLGQR TTVFCGLCQT K
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