| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0188 |
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| Symbol | rpmD |
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| ID | 4017908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 204841 |
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| End bp | 205023 |
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| Gene Length | 183 bp |
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| Protein Length | 60 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637954164 |
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| Product | 50S ribosomal protein L30 |
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| Protein accession | YP_561208 |
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| Protein GI | 91791557 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1841] Ribosomal protein L30/L7E |
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| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000158011 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTACTA AAACTTTAAA AGTTACACAG ACTAAAAGCG GCATTGGTCG TTTACCAAAG
CACCGTGCAA CCTTAACCGG TTTAGGTCTA CGTCGTATTG GTCACACTGT TGAATTAGAA
GATACTCCTT CTGTTCGCGG TATGATCAAT AAGGTTTACT ACATGGTTTC GGTGGAGGGA
TAA
|
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| Protein sequence | MATKTLKVTQ TKSGIGRLPK HRATLTGLGL RRIGHTVELE DTPSVRGMIN KVYYMVSVEG
|
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| |