| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0184 |
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| Symbol | rpsH |
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| ID | 4017866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 203021 |
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| End bp | 203413 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954160 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_561204 |
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| Protein GI | 91791553 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000050833 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATGC AAGATCCTAT TGCGGATATG TTAACCCGTA TTCGTAACGG CCAAGCTGCT
AACCACGTAT CTGTAAAGAT GCCTTCAGCA AAGTTAAAAG TAGCAATCGC GAAATTACTT
CAAGATGAAG GTTTTATTAC TGGATACGCC GTAGCAGATG AAGCTAAGCC TGAATTAGAA
ATCACTTTAA AGTATTTCCA AGGCAAACCA GTCGTTGAGA CTATCCAGCG CGTAAGTCGC
CCAGGTCTTC GTATTTACAA AGGTAAAGAC GAACTTCCTA AGGTGATGGG CGGTCTGGGT
ATCGCAATTG TGTCCACTTC TCAAGGCTTG ATGACTGATC GTGCCGCCCG CCAAAATGGC
ACGGGTGGCG AGGTTATCTG CTACGTAGCG TAA
|
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| Protein sequence | MSMQDPIADM LTRIRNGQAA NHVSVKMPSA KLKVAIAKLL QDEGFITGYA VADEAKPELE
ITLKYFQGKP VVETIQRVSR PGLRIYKGKD ELPKVMGGLG IAIVSTSQGL MTDRAARQNG
TGGEVICYVA
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