| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0182 |
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| Symbol | rplE |
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| ID | 4017864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 202141 |
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| End bp | 202680 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954158 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_561202 |
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| Protein GI | 91791551 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000628056 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGAAAC TGCATGATAA ATATCAAGAG ACTGTCGTCG CTGAACTAGC AAAAAAGTTC
GGCTATAGCA GTGTCATGCA AGTCCCTCGG ATTGAAAAAA TCACCCTGAA CATGGGTGTG
GGCGAAGCAG TAGCAGACAA GAAAGTTATG GAGCACGCGC TCCGTGATAT GACTGCAATT
GCTGGCCAAA AGCCAATTGT AACTGTTGCT CGCAAATCAG TTGCTGGTTT TAAAATCCGT
GAAGGCTACC CTATTGGCTG TAAAGTGACC CTGCGCGGTG AGCGTATGTG GGAATTTTTA
GAGCGTCTAG TTGACATAGC AATCCCACGT ATTCGTGACT TCCGTGGCTT AAGCGCTAAA
GCGTTTGACG GCCGTGGTAA CTACGCAATG GGCGTGCGTG AGCAGATCAT CTTCCCAGAA
ATCGATTACG ATAAAATCGA TAAAATTCGC GGTATGGATA TTGTTATCAC TACCTCTGCG
AAGACTGATG AAGAAGGTCA TGCCTTGTTG ACCGCTTTTA ACTTCCCATT CAAGAAATAA
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| Protein sequence | MAKLHDKYQE TVVAELAKKF GYSSVMQVPR IEKITLNMGV GEAVADKKVM EHALRDMTAI
AGQKPIVTVA RKSVAGFKIR EGYPIGCKVT LRGERMWEFL ERLVDIAIPR IRDFRGLSAK
AFDGRGNYAM GVREQIIFPE IDYDKIDKIR GMDIVITTSA KTDEEGHALL TAFNFPFKK
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