Gene Sden_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0181 
SymbolrplX 
ID4017863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp201814 
End bp202128 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content42% 
IMG OID637954157 
Product50S ribosomal protein L24 
Protein accessionYP_561201 
Protein GI91791550 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0198] Ribosomal protein L24 
TIGRFAM ID[TIGR01079] ribosomal protein L24, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.29578e-11 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCAA AAATACGTCG TGAAGACGAA ATAATTGTAC TAGCAGGTAA AGACAAGGGT 
AAACGCGCAA AAGTTTCTCA AGTCCTACCA ACTGGTAAAT TAATTGTTGA AGGCATCAAT
CTAGTTAAAA AGCACCAGAA GCCAAACCCA CAATTGGGCG TGACTGGCGG CGTTATCGAG
AAAGAAGCAC CGATACAAAC ATCAAACGTA GCGATCTTTA ACCAAGCCAC AGGCAAGGCA
GATCGTGTTG GTTTCCGATT CGAAGACGGC AAAAAAGTCC GTTTCTTTAA ATCGAATAGT
GAACTCATTA AGTAA
 
Protein sequence
MAAKIRREDE IIVLAGKDKG KRAKVSQVLP TGKLIVEGIN LVKKHQKPNP QLGVTGGVIE 
KEAPIQTSNV AIFNQATGKA DRVGFRFEDG KKVRFFKSNS ELIK