| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0177 |
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| Symbol | rplP |
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| ID | 4017859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 200405 |
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| End bp | 200815 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954153 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_561197 |
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| Protein GI | 91791546 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000245989 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGCAAC CTAAACGTAT GAAGTTTCGC AAGATGTTCA AGGGCCGCAA CCGTGGTCTA
GCGAACGGTA CTGAAGTTAG CTTTGGTACT TTCGGTTTGA AAGCAGTCGG CCGTGGCCGT
TTAACTGCAC GTCAAATCGA ATCTGCACGT CGTGCCATGA CACGTCACGT AAAGCGTCAA
GGACAAATTT GGATTCGAGT TTTCCCTGAC AAGCCAATTA CCTCTAAGCC TCTTGAAGTG
CGTATGGGTA AAGGTAAAGG TAACGTTGAA TACTGGGTAT GTCAGATTCA ACCTGGTAAG
GTTCTTTATG AGATGGATGG TGTTCCTGAG TCGTTGGCTC GTGAAGCCTT CGCTTTGGCT
TCTGCCAAAC TTCCTATTAA GACTACCTTC GTAACTAAGA CGGTGATGTA A
|
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| Protein sequence | MLQPKRMKFR KMFKGRNRGL ANGTEVSFGT FGLKAVGRGR LTARQIESAR RAMTRHVKRQ
GQIWIRVFPD KPITSKPLEV RMGKGKGNVE YWVCQIQPGK VLYEMDGVPE SLAREAFALA
SAKLPIKTTF VTKTVM
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