| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0170 |
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| Symbol | rplC |
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| ID | 4017852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 196648 |
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| End bp | 197286 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954146 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_561190 |
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| Protein GI | 91791539 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000029478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTATCG GTCTTATCGG TCGTAAAGTG GGTATGACTC GCATCTTCAC TGAAGATGGT
GTGTCGATCC CAGTAACAGT AATTGAAGTT GCTGGCAACC GTGTTACTCA AGTGAAAACT
TTAGAAACTG ACGGTTACCG TGCACTTCAA GTGACTACTG GTACCAAAAA AGCCAATCGC
ATCACTAAAG CTGAAGCAGG TCACTTTGCC AAGGGCGGCG TAGAAGCCGG TCGTGGTTTG
TGGGAAATGC GTTTGGCAGA TGGTGAAGGC GAAGGCATTG AAGTAGGTGC TGAGCTTAAT
GTTGATATTT TCGCAGAAAC TGTGAAAGTA GACGTTACCG GTCAATCAAA AGGTAAGGGT
TTCCAAGGCG GCGTTAAGCG TTGGAACTTC CGTACTCAAG ATATGACTCA CGGTAACTCT
TTGGCACACC GTTCGAATGG TTCTATCGGT CAGAACCAAA CGCCTGGTCG TGTATTCAAA
GGCAAGAAAA TGTCAGGCCA TATGGGTGCT GAGCAAGTAA CAACTCAAAA TCTGCACGTA
GTACGTGTTG ATTCAGAGCG TAACTTGATT CTAGTACGCG GCGCAGTTCC AGGCGCTACC
AATGGTGACT TGATTATCAA GCCAGCAGTT AAAGCTTAA
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| Protein sequence | MAIGLIGRKV GMTRIFTEDG VSIPVTVIEV AGNRVTQVKT LETDGYRALQ VTTGTKKANR
ITKAEAGHFA KGGVEAGRGL WEMRLADGEG EGIEVGAELN VDIFAETVKV DVTGQSKGKG
FQGGVKRWNF RTQDMTHGNS LAHRSNGSIG QNQTPGRVFK GKKMSGHMGA EQVTTQNLHV
VRVDSERNLI LVRGAVPGAT NGDLIIKPAV KA
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