| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0169 |
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| Symbol | rpsJ |
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| ID | 4017851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 196309 |
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| End bp | 196620 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954145 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_561189 |
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| Protein GI | 91791538 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000585443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGAACC AAAGAATCCG TATCCGCTTG AAAGGCTTTG ATCATCGTTT GATTGATCAG
TCTACAGCGG AAATCGTTGA AACTGCTAAG CGTACAGGCG CGCAGGTCCG TGGTCCAATT
CCACTACCTA CTCGCAAAGA GCGTTTTACC GTTTTGATCT CTCCGCACGT TAATAAAGAT
GCTCGTGATC AGTACGAAAT CCGTACTCAC AAGCGTTTAG TTGACATCGT AGAGCCAACA
GAAAAGACAG TAGATGCGTT AATGCGTCTC GATCTTGCGG CTGGTGTCGA CGTTCAGATT
AGCTTAGGTT AA
|
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| Protein sequence | MQNQRIRIRL KGFDHRLIDQ STAEIVETAK RTGAQVRGPI PLPTRKERFT VLISPHVNKD
ARDQYEIRTH KRLVDIVEPT EKTVDALMRL DLAAGVDVQI SLG
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