Gene Sden_0124 details

Gene Information

• Locus tag: Sden_0124
• ID: 4017208
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 136274
• End bp: 136708
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637954097
• Product: general secretion pathway protein G
• Protein accession: YP_561144
• Protein GI: 91791493
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACAGA ATCGCAAACA ACAAGGTTTT ACCCTATTAG AAGTCATGGT CGTTATCGTG 
ATTTTAGGTA TTTTGGCCTC TATGGTAGTG CCTAACCTTA TGGGTAACAA AGACAAGGCT 
GACCAACAAA AAGCCGTGTC AGACATAGTG GCATTAGAGA ATGCCTTAGA CATGTACAAG 
TTAGACAACA GCTATTACCC AACTACAGAT CAAGGCTTAG ATGCCTTAGT CAATGCGCCA 
ACCTCGTCAC CTGAAGCCCG TAATTATCGT GAAGGTGGTT ATGTGAAGCG TCTGCCACAG 
GACCCTTGGG ATAATGCCTA TTTGCTACTT AGCCCAGGCG AGCAAGGTAA GATAGACATT 
TTCAGTGCAG GACCGGATCG TCAGCCGGGC ACAGAAGATG ATATTGGCAG CTGGAACCTG 
CAAGACTTTC AATAA 

 

Protein sequence

MKQNRKQQGF TLLEVMVVIV ILGILASMVV PNLMGNKDKA DQQKAVSDIV ALENALDMYK 
LDNSYYPTTD QGLDALVNAP TSSPEARNYR EGGYVKRLPQ DPWDNAYLLL SPGEQGKIDI 
FSAGPDRQPG TEDDIGSWNL QDFQ