| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0060 |
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| Symbol | |
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| ID | 4017183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 69065 |
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| End bp | 70243 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637954033 |
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| Product | protein of unknown function DUF1078-like protein |
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| Protein accession | YP_561080 |
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| Protein GI | 91791429 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1749] Flagellar hook protein FlgE |
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| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACAGG CTTTTTATAC TGGATTATCT GGACTTAATA GTTACTCTAA AAATTTAGAT
AATGTGAGTA ATAATATCGC AAATATGAAT ACTGCTGGTT ATCGTGGAAT GGACAGCTTT
TATCAAGCAT TGGGCGGTGA TAGTGATAAA CCGGGTTTAG GTGCGCAAAT CTCGGGTCTT
GGATATCGAT TTTCAGTGGG AGATATCAGA CAGACTGGCA ATGATTTTGA TTTAGCCATT
ACAGGTACAG GATTTTTTGC TTTATTGGAT GGTGAAAAGG TTTTCTACAC TCGAACGGGT
CAGTTTGAGT TTGATCAGAA TAATGTACTC GTCGATAAAA ATACCGGTTT TAAGGTGGCA
GGCATTGATA GTAATGGTCA ATTAAGTGAA ATCAATCTGC TGAGTTATCA GGCAATTAAA
CCTACAGCAA CGACAAAGCT ATCTCTCACA GGTAACTTAT CGCCATTAGA TGATGTGCAT
CAAATCAGCA GTGCCAAAAT GATTAATTCA TTAGGGGAAG AAGTTGATCT AAGTATTAAG
TTTACTAATG AAAAGGCTAC ATTCCCTAAT CAATGGAAAG TAGAGATACT TGATGATAAA
GGCATTGTGC TTCACAGCGA TTCAGTCAAG TTTGGCCCAG ATGGTACACC CGAAGTCGGC
AGTGGTTCAT TCATTTTCAA TCTGGCAGAT AGCAGCGGAA ATACAACACC AATAGACATT
ACTGTCGGAA CCATTGGCGA TTTTTCAGCT GTGACTCAAA CGAGTGCAAC AGGTGTTGAT
TCAAATGTGA CATTACATGC TGTTGATGGT AAAGGTGTTG GTCAATTGGT CAAGCGTAGT
TTTGATCCAC AAGGAAGGGT TACACTAAAT TATAGTAATG GGGATAAGGT GACACCATTT
ACCATTGCTA TGGTAGATTT TGATGATATC AGCACATTAT CCATTGAATC TGGCACAGTA
TTTAAAGCTA GTGATTTAGA GAGTCGGGTG CTTGGTAAGG CTGGAGAGGG ACGATTTAAG
CAGCTGGCGA CTTCGAGTAT AGAGATGTCG AATGTCGATT TGTCTCAAGA ATTTGCCGAC
ATGCTCGTTA TTCAAAGAGG TTATCAGGCT AGCTCAAGAA TTTTGAATGT CGCAAATCAG
ATGATAGAAC AGTTATATGA AAATACCAGA GGTCGCTAA
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| Protein sequence | MLQAFYTGLS GLNSYSKNLD NVSNNIANMN TAGYRGMDSF YQALGGDSDK PGLGAQISGL
GYRFSVGDIR QTGNDFDLAI TGTGFFALLD GEKVFYTRTG QFEFDQNNVL VDKNTGFKVA
GIDSNGQLSE INLLSYQAIK PTATTKLSLT GNLSPLDDVH QISSAKMINS LGEEVDLSIK
FTNEKATFPN QWKVEILDDK GIVLHSDSVK FGPDGTPEVG SGSFIFNLAD SSGNTTPIDI
TVGTIGDFSA VTQTSATGVD SNVTLHAVDG KGVGQLVKRS FDPQGRVTLN YSNGDKVTPF
TIAMVDFDDI STLSIESGTV FKASDLESRV LGKAGEGRFK QLATSSIEMS NVDLSQEFAD
MLVIQRGYQA SSRILNVANQ MIEQLYENTR GR
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