Gene Sden_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0059 
Symbol 
ID4017182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp68643 
End bp69050 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content38% 
IMG OID637954032 
Productflagellar hook capping protein 
Protein accessionYP_561079 
Protein GI91791428 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTC AATCTATTGG TGGTAATTCA TATGCGACGA CGAATCCACA GACAAATATT 
AAACTAGATG ATTTTTTACA GCTATTTGTT GCGCAATTAA ATTATCAAGA CCCGCTAGAG
CCAGTCAATA ATAGTGAGTT TTTGGCGCAG TTAGCGCAAT TTTCGTCACT TGAGATAAAT
CGCCAGAGTA ATGATAATTC ATTATCTCTC TTGGCTATTG GTTCATCAGA TCAAGCCTTG
GGATTAATAG GGCGAAGTGT TGAAGTTAAC ACGCAAAGTG GTCAAGCATT TATTGGTGAT
GTAACAGGAG TGAACTTTAC TCAACAGGGA CCTATGTTAA CGGTAAAAGG GGCTGATGAC
TCGCTTCTAA CTGATATCAA ACTAGGTCAA ATTACTGTAG TTAAATAA
 
Protein sequence
MDIQSIGGNS YATTNPQTNI KLDDFLQLFV AQLNYQDPLE PVNNSEFLAQ LAQFSSLEIN 
RQSNDNSLSL LAIGSSDQAL GLIGRSVEVN TQSGQAFIGD VTGVNFTQQG PMLTVKGADD
SLLTDIKLGQ ITVVK