| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0046 |
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| Symbol | |
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| ID | 4017245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 59453 |
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| End bp | 60214 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637954019 |
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| Product | protein of unknown function DUF1078-like protein |
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| Protein accession | YP_561066 |
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| Protein GI | 91791415 |
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| COG category | [N] Cell motility |
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| COG ID | [COG4786] Flagellar basal body rod protein |
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| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGATG CATTATACAT TGCAGAGTCA GGATTAGATG CAAAGCAAAA ACAACTTGAT
GCCATTGCTC ATAATATAGC TAACGTATCG ACTCCAGGCT ACAAAACAAG TCAAATGAGT
TTTATGACTG TGGTGCAGGA AGATCGCGAT AATTCAGGTC AAATTGTTAG CTCTCAAGGC
TTAGGTGTCA TGGCGCAACA ATCTCCGCTT GATATGTCTG TAGGCAAAAT GGAGCAGACC
GGACGTCCGT TAGATGTTGC GATTAATGGG GCTGGTTTTT TAGAGGTCGA ACAAGGGAAT
GGCAAGCTTT TATATTCTAG AGGCGGTCGA TTGATCACTG ATGCACAAGG TTATTTGAGC
ACTGAAAATG GCTTAAGGCT GACATCAATG CTGCAAATCC CCCCAGATGC TGAAGATGTT
AGGATTGCCA CCGATGGAAT GTTGAGTGCT AAATTGCCTG GCAATGAGGT CATTGAAATC
GGTCAAGTTC AGCTGGTTAA CTTTGTTGAT ATGTCAGCGA TAAAGGCCGT TGGTAATAAT
TTATTTGAAG TCGATCAAGA AGCACTTAAT ACAGCCTATT ACGGCTCTGT GGGTGAAAGT
GGGATGGGGG TGCTACAGCA AGGGATGTTG GAGTCTTCAA ATGTTTCTAT GAACCAAGAA
ATGATGAATA TGATGATGGC TCAACGTAGT TACCAGCTCA ATGCCCGGCT CGTCCAAGTA
TCAGATCAAA TATTAGAAAC ACTCAATAAC TTAAGACGAT AA
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| Protein sequence | MIDALYIAES GLDAKQKQLD AIAHNIANVS TPGYKTSQMS FMTVVQEDRD NSGQIVSSQG
LGVMAQQSPL DMSVGKMEQT GRPLDVAING AGFLEVEQGN GKLLYSRGGR LITDAQGYLS
TENGLRLTSM LQIPPDAEDV RIATDGMLSA KLPGNEVIEI GQVQLVNFVD MSAIKAVGNN
LFEVDQEALN TAYYGSVGES GMGVLQQGML ESSNVSMNQE MMNMMMAQRS YQLNARLVQV
SDQILETLNN LRR
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