Gene Sden_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0041 
Symbol 
ID4017240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp54704 
End bp54952 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content40% 
IMG OID637954014 
Productexport protein FliQ 
Protein accessionYP_561061 
Protein GI91791410 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1987] Flagellar biosynthesis pathway, component FliQ 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGGTT ACCTCTCAGA ATTTTTTTGG GTCACCTCAA AACTTGCAAT GCCGATACTT 
GCCACTGCGC TTGTGGTTGG CTTGCTCATC AGCATTTTTC AAGTCGTTAC ACAAATTCAA
GAAATGACAC TCACATTTGT ACCTAAATTG ATCGTGGTAT TAATTGTTGT TGGCATGTTG
TCGGGGTGGT TGTTAGAGAC AATACAAACA TATGCCATTA CGACTATTAG CAAAATTGCT
GAGTTTTAG
 
Protein sequence
MLGYLSEFFW VTSKLAMPIL ATALVVGLLI SIFQVVTQIQ EMTLTFVPKL IVVLIVVGML 
SGWLLETIQT YAITTISKIA EF