| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0029 |
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| Symbol | |
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| ID | 4017895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 35377 |
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| End bp | 35943 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637953999 |
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| Product | SUA5/yciO/yrdC-like protein |
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| Protein accession | YP_561049 |
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| Protein GI | 91791398 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00284591 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGCAAC TGTCCTCTAC TCAAGTTACC CCTGTGATAG CTCAGGGTGG TGTTATCGCT
TACCCTACGG AGGCGGTTTA TGGTTTAGGT TGCGATCCTG ATAACGACCA AGCCATAGAA
AAGCTATTGG CAGTCAAACA GAGGCCTTGG CAGAAGGGGC TTATCTTAGT CGCCAGTTCT
TTTGAGCAAT TATTACCTTA TGTCGATGTC GCTCAGTTAA CTCAAGCTCA ATTAGACTTT
GCTCACAGCA AATGGCCAGG CCCCTTTACC TTCGTGATGC CGGTAAAGTC ACACGTATCT
AACAAATTGC GCGGCGAGTT TGACTCCATC GCGGTGCGCG TTTCGGCTCA CCCCATAGTG
CGTGAGCTGT GCGATAGCTT GAATAAGCCG CTCGTGTCCA CCAGTGCTAA CTTGGCAGGC
CAAGATCCTG TGCTTACAAG TCGCCAAATA TTGACTGACT TTGCTGATAA AATTGATGCA
CTCGTGTTAG GGGATTTAGG TCAACAAGCG CAACCTTCCA CCATAATTGA TGCCCGCAGC
GGGCTAGTTT TACGTAACGG ACAATAA
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| Protein sequence | MLQLSSTQVT PVIAQGGVIA YPTEAVYGLG CDPDNDQAIE KLLAVKQRPW QKGLILVASS
FEQLLPYVDV AQLTQAQLDF AHSKWPGPFT FVMPVKSHVS NKLRGEFDSI AVRVSAHPIV
RELCDSLNKP LVSTSANLAG QDPVLTSRQI LTDFADKIDA LVLGDLGQQA QPSTIIDARS
GLVLRNGQ
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