| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0024 |
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| Symbol | def |
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| ID | 4017890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 31299 |
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| End bp | 31811 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637953994 |
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| Product | peptide deformylase |
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| Protein accession | YP_561044 |
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| Protein GI | 91791393 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACTAT TAAATGTATT ACGCTTTCCA GACGAACGCT TACGAACGAT TGCCGTGCCT
GTAACTGATT TCGGACCGCA ACTACAAGCC CAAATCGACA GCATGATTGA AACCATGTAC
GCAGAGAAAG GCATAGGACT CGCCGCTTCT CAGGTGGATT TTCATCAACA GCTTATCGTG
ATGGATCTGC AAGATGACAT TGAGCGCCCA AAAATATTCA TCAATCCTGA GATAGTCGCC
AAGAGCGGCG AGTTCAGTAA CGAAGAAGGT TGCTTATCCG TACCCGGCGT CTATGCCAAA
GTGGATCGCG CCGAGTTTGT GACTTTGAAA GCCTTAGACA GAGACGGCAA GCCCTTTACA
GTGGAAGCCG ACGAGTTATT TGCTATCTGT ATTCAGCATG AAATGGATCA CCTTAAAGGC
AAGTTGTTCG TGGATTATTT ATCGCCACTT AAGCGCCAGC GCATCAAGAC CAAGCTTGAA
AAAGAAGCCC GATTAGAAGC AAAAGGCAAC TAA
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| Protein sequence | MPLLNVLRFP DERLRTIAVP VTDFGPQLQA QIDSMIETMY AEKGIGLAAS QVDFHQQLIV
MDLQDDIERP KIFINPEIVA KSGEFSNEEG CLSVPGVYAK VDRAEFVTLK ALDRDGKPFT
VEADELFAIC IQHEMDHLKG KLFVDYLSPL KRQRIKTKLE KEARLEAKGN
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