| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0023 |
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| Symbol | |
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| ID | 4017889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 30333 |
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| End bp | 31292 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637953993 |
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| Product | methionyl-tRNA formyltransferase |
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| Protein accession | YP_561043 |
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| Protein GI | 91791392 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAT TAAATATTAT CTTTGCCGGT ACACCGGATT TTGCCGCTAG ACATTTACAA
GCCTTACTCG ACTCTGAGCA CAATGTCATT GCCGTTTACT CGCAGCCAGA CAGACCGGCT
GGGCGCGGTA AAAAACTCAG TGCCAGCCCA GTAAAAGAGC TAGCCTTGAG CCATGATATC
CCGGTGTTTC AACCCGCCTC CTTAAGGGCT GTTGAAGCCC AAGCTGAGCT CGCCACACTG
AATGCCGACA TCATGGTGGT GGTGGCTTAT GGCTTAATCT TACCTCAGAT AGTATTAGAC
ACCCCACGCT TAGGTTGTAT TAACGTTCAT GGCTCTATCT TGCCTCGTTG GCGTGGCGCG
GCGCCTATCC AAAGAGCACT TTGGGCCGGT GATACAGAAA CTGGCGTTAC CATAATGCAA
ATGGATCTCG GCCTCGATAC CGGCGATATG TTACTTAAAA CCTCCTTGCC TATCGAAGAC
GCTGATACCT CAGCGAGCCT CTATGAAAAG TTAGCCGTCC AAGGGCCCCA GGCCTTGCTC
GAAGCACTCG ATGGCTTAAA TGCAGGCAAG CTTAAAGGTG AGCCACAAGA CCCAGCATTA
GCCAACTACG CAGAAAAACT TTCCAAAGAA GAAGCAAGAC TCGACTGGAA CAAGAGCGCC
AAACAGTTAT GGCAAGAAAT CCGAGCCTTT AATCCCTGGC CTGTGAGTTA CTTTGAATAC
CAAGACAGCA CCATTAAAGT CTGGCAGGCA AGCTATAATC CACAGCCTAA TAGCGCACTT
GCAGGTAGCA TTATCAAAGC AGATAAACAC AGCATAGAAG TCGCAACCGC CGAAGGCAGT
TTGCAGCTAG AAATTATACA GCTGCCGAAC AAAAAACCAC TCGCGGTTGC CGACATTTTA
AATTCTCGCG CCGATTGGTT TGCTCAAGGC CTTAGCTTGC TGCCAGAGGC GAGTTCATGA
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| Protein sequence | MKPLNIIFAG TPDFAARHLQ ALLDSEHNVI AVYSQPDRPA GRGKKLSASP VKELALSHDI
PVFQPASLRA VEAQAELATL NADIMVVVAY GLILPQIVLD TPRLGCINVH GSILPRWRGA
APIQRALWAG DTETGVTIMQ MDLGLDTGDM LLKTSLPIED ADTSASLYEK LAVQGPQALL
EALDGLNAGK LKGEPQDPAL ANYAEKLSKE EARLDWNKSA KQLWQEIRAF NPWPVSYFEY
QDSTIKVWQA SYNPQPNSAL AGSIIKADKH SIEVATAEGS LQLEIIQLPN KKPLAVADIL
NSRADWFAQG LSLLPEASS
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