| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0019 |
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| Symbol | |
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| ID | 4017811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 26769 |
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| End bp | 27296 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637953989 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_561039 |
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| Protein GI | 91791388 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG4635] Flavodoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTAAGA CGTTACTCTT ATATTCGACT GTGGATGGAC AAACCTTGGC AATTTGCCAG
CGGATGCAAA CGGTTATGAC GCAGGCCGGT GAGCAGGTTG AATTGCTGAG CTTAAACGAT
TGTAGCGGCG ACGCACTGAC CCAAGTGGAT AGAGTCTTGA TTGGTGCTAG CATACGTTAT
GGCAAGCATA GGCCTGAGTT GTTGAGTTTT ACTAACACGC ATCAAGATTT ACTCAACAGT
AAAATGAATG GCTTTTTTAC TGTTAATGTT GTCGCCAGAA AGCCGGAGAA AAACACCCCA
GCAACAAACC CCTATATGAT TAAGTTTTTA CAGTTATCGG CTTGGCAGCC TAAGGTATTA
GGCGTGTTTG CCGGTAAAAT AGCCTATCCA AAATACGGCC CATTTGACCG TTTTATGATA
CGTTTTATCA TGTGGATGAC CAAAGGCCCG ACGGACACCA AAGGGACATT TGAGTTTACC
GATTGGAATA AGGTCGATGA GTTTGCCGGA TCCTTTGTGA AGCAGTGA
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| Protein sequence | MTKTLLLYST VDGQTLAICQ RMQTVMTQAG EQVELLSLND CSGDALTQVD RVLIGASIRY
GKHRPELLSF TNTHQDLLNS KMNGFFTVNV VARKPEKNTP ATNPYMIKFL QLSAWQPKVL
GVFAGKIAYP KYGPFDRFMI RFIMWMTKGP TDTKGTFEFT DWNKVDEFAG SFVKQ
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