| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0016 |
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| Symbol | |
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| ID | 4017808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 23301 |
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| End bp | 24623 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637953986 |
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| Product | proline dipeptidase |
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| Protein accession | YP_561036 |
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| Protein GI | 91791385 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0006] Xaa-Pro aminopeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.98827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCAAC TGGCTCATCA CTTTAGTGAA CATATTGTAG AACTTAATCG ACGCGTTGCA
GAGATTATTG CAAGAGAAAA ACTATCGGGA TTAGTGATCC ATTCGGGGCA GCACCATAGG
CAATTTTTGG ATGATATGAA TTATCCGTTC AAGGTGAATC CTCAGTTCAA AGCTTGGGTG
CCCGTAATTG ATAACCCTAA CTGTTGGTTG ATCGTTAATG GCCGTGACAA GCCCACCTTA
GTCTTTTATC GTCCTGTGGA TTTTTGGCAT AAAGTCAGCG ACGTCCCTGA TGCCTTTTGG
ACTGAACATG TAGATATTAA ATTGCTGACT AAGGCCGATA GGGTGGCGGA GTTTTTACCC
AAAGACATCA CCAATTGGGC TTATTTAGGC GAACATTTAG ATGTTGCGGA TGTATTAGGT
TTCACGTCTC GCAATCCAGA CGCTGTGATG AACTATTTGC ATTATCACAG AGCGAGCAAG
ACTCAATATG AACTTGAGTG TATGCGTCAA GCCAATAAAA TCGCCGTTAA AGGCCATCAA
GCGGCTAAAA ATGCCTTCTA TAACGGTGGC AGCGAGTTTG AAATTCAGCA GCAATATCTG
TCAAGTGTTG GCCAGACTGT AAACGAAGTG CCTTACGGTA ATATTGTTGC CCTCAATCAA
AACGCCGCGA TTTTGCACTA TACGGCGTTA GAGCACACTA AGCCTGCGCA GCGCTTGTCA
TTCTTATTGG ATGCAGGGGC TAACTTTCAT GGTTACGCTT CGGACATTAC CCGAACCTAT
GCCTTTGAGA AAAATAGCTT TTGCGATCTT ATCAGTGCAT TAAATGCTGT TGAGCTTGCC
ATAATAGACA GAATAAAGCC TGGGGTTAAA TACACAGACT TACATATAGA AACCCATCAT
CATATTGCTC AATTACTGCT GGATTTTAAT CTGGCCACAG GCGATGCCGC AGGTTTGGTC
GATCAGGGGA TCACTAACGT ATTCTTCCCC CATGGTTTGG GCCATATGCT TGGGCTGCAA
GTGCACGACA TGGGCGGTTA TCTCCATGAT GAGCGTGGCA CTCATATTCC AGCACCAGAA
GCACACCCTT ATTTGCGCTG TACCCGAACA TTAGAAGCCA ATCAAGTGCT GACCATAGAG
CCTGGTTTGT ACATTATTGA CTCTTTGCTG GACGAACTTA AGCAAGACAG TCGTAAGCAA
CAAATCAATT GGGACCAAGT CGCGCATTTT CGTCCCTTCG GCGGCATACG CATAGAAGAC
AATGTCATAG TGCATCAAGA CAGAAATGAG AACATGACCC GTGAGTTTGG CCTGATTGAT
TGA
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| Protein sequence | MDQLAHHFSE HIVELNRRVA EIIAREKLSG LVIHSGQHHR QFLDDMNYPF KVNPQFKAWV
PVIDNPNCWL IVNGRDKPTL VFYRPVDFWH KVSDVPDAFW TEHVDIKLLT KADRVAEFLP
KDITNWAYLG EHLDVADVLG FTSRNPDAVM NYLHYHRASK TQYELECMRQ ANKIAVKGHQ
AAKNAFYNGG SEFEIQQQYL SSVGQTVNEV PYGNIVALNQ NAAILHYTAL EHTKPAQRLS
FLLDAGANFH GYASDITRTY AFEKNSFCDL ISALNAVELA IIDRIKPGVK YTDLHIETHH
HIAQLLLDFN LATGDAAGLV DQGITNVFFP HGLGHMLGLQ VHDMGGYLHD ERGTHIPAPE
AHPYLRCTRT LEANQVLTIE PGLYIIDSLL DELKQDSRKQ QINWDQVAHF RPFGGIRIED
NVIVHQDRNE NMTREFGLID
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