| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0014 |
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| Symbol | fadA |
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| ID | 4017806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 19738 |
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| End bp | 20901 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637953984 |
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| Product | 3-ketoacyl-CoA thiolase |
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| Protein accession | YP_561034 |
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| Protein GI | 91791383 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02445] fatty oxidation complex, beta subunit FadA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0013127 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACAAG CTGTTATCGT AGACTGCATT CGTACCCCAA TGGGCCGCTC TAAGGCTGGG
GTATTTAGGA ATGTACGTGC AGAAACTTTG TCTGCCGAAT TAATGAAAGC CTTACTTATT
CGCAACCCAC AACTGGATCC CAGTCTGATT GAAGATGTGA TCTGGGGTTG TGTGCAGCAA
ACATTAGAGC AAGGCTTTAA CATAGCCCGT AATGCGTCAC TGCTGGCTGG CATTCCAAAG
ACAGCCGGTG CTGTCACAGT AAACCGCTTA TGCGGTTCAT CTATGGATGC CATTCATCAA
GCGGCACGCG CCATTATGAC AGGCATGGGC GACACCTTTA TCATTGGTGG TGTTGAACAC
ATGGGCCACG TACCTATGAA TCACGGCGTG GATTTCCACC CAGGTTTAGC TAATCGTGTT
GCTAAAGCCT CAGGCATGAT GGGCTTAACC GCCGAAATGC TAGGTAAAAT GCATGGCATT
AGCCGTGAGC AACAAGATGC GTTTGCAGTG CGCTCACATC AGCGTGCTCA TGCTGCTACT
GTTGAAGGCC GCTTTGCCAA AGAAATTTGG GCTATGGAAG GTCATGACGC CAACGGTGCC
TTGATCAAAG TGATGCATGA TGAAGTCATC CGCCCTGAAA CTACCATGGA ATCACTTGCC
GGACTTCGCC CGGTATTTGA TCCTGCCAAT GGTACTGTGA CAGCCGGCAC TTCGTCTGCC
CTGTCTGATG GTGCATCAGC CATGTTAGTG ATGGAAGAAT CTAAGGCTCG TGCTTTAGGT
TTACCAATCC GTGCACGCAT CCGCTCAATG GCGGTTGCCG GTTGTGATGC GGCTATCATG
GGTTATGGCC CTGTACCTGC AACTCAAAAA GCATTAGCTC GCGCTGGCTT AACCGTTGCC
GATTTAGATG TCATCGAGCT TAATGAAGCC TTTGCCGCTC AGTCACTGCC TTGCGTTAAA
GACTTAGGTC TTCAAGATGT GGTTGAAGAG AAAATCAACC TTAACGGTGG TGCGATTGCA
CTCGGCCATC CACTGGGTTG TTCTGGTGCA CGTATTTCTA CGACCCTGAT TAACTTGATG
GAAGAGAAAG ATGCCACCAT AGGTCTAGCG ACTATGTGTA TCGGTCTTGG TCAAGGTATT
GCGACTGTGT TCGAGCGCGT TTAA
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| Protein sequence | MKQAVIVDCI RTPMGRSKAG VFRNVRAETL SAELMKALLI RNPQLDPSLI EDVIWGCVQQ
TLEQGFNIAR NASLLAGIPK TAGAVTVNRL CGSSMDAIHQ AARAIMTGMG DTFIIGGVEH
MGHVPMNHGV DFHPGLANRV AKASGMMGLT AEMLGKMHGI SREQQDAFAV RSHQRAHAAT
VEGRFAKEIW AMEGHDANGA LIKVMHDEVI RPETTMESLA GLRPVFDPAN GTVTAGTSSA
LSDGASAMLV MEESKARALG LPIRARIRSM AVAGCDAAIM GYGPVPATQK ALARAGLTVA
DLDVIELNEA FAAQSLPCVK DLGLQDVVEE KINLNGGAIA LGHPLGCSGA RISTTLINLM
EEKDATIGLA TMCIGLGQGI ATVFERV
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