Gene Sden_0006 details

Gene Information

• Locus tag: Sden_0006
• ID: 4017798
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: -
• Start bp: 7441
• End bp: 8154
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637953976
• Product: hypothetical protein
• Protein accession: YP_561026
• Protein GI: 91791375

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTTGCC ATTCAAGCAT AAAACCCCAC TGGCAATTAG AGCAAGTTCA GCTCTTTTTA 
AGCAATTTCA GCCTAGATGG ACAGCCCCAG GCATTGAGTA AAGAAACTGT AGGCGCGAGT 
AAATATCAGC AAGCCAGTGT CGCCTTATTA GGCAGTGACT GCCAAGGCGA GCAAAACTGG 
CTGCTTAGTT TTGATAAAGC ATTAAAACCT GGGCTGATGA CTTTCGAGCT GGGGGTGCCG 
TTTGAGTTAA ATCATGGCAA TCCGTTATTG GCTGAAACGC CATTAAATCA AAGTGACATG 
TTTTGGACTT GGCAGCAAGG CCATAAATTC CTGAGAATTG ATCTCGCTAA GACCTTATTA 
ACTGAGCCTG CTGTTGGCAA GCAAACGGGC TGGCAATTCC ATTTAGGCTC TGTGGCTTGT 
CAATCCGCCA GTGTAATGCG CTCACCGACT CAAGCTTGTA AACAGCCAAA TAGAGCCAAA 
TTTAGCTTAG ATTACCAAGG GCAACATCAG TTAAATCTCG ACTTAGCAGT CCTGCTTGCC 
CCGCTGCTCG ATGACCCCCA ATTATCTCAG CAATCTTGCA TGTCCGACTC AGCAAGTAAA 
ACTTGTCAGT TACTATTTTC CCGCCTAGGC CTAGGTCAGG CGTTACCGTT TGAGACACAG 
CAGCTGAGTA TTAATGCCAT TGAGCCTGTG GCGCCTCTTT GGTGGTTTAA CTAA 

 

Protein sequence

MGCHSSIKPH WQLEQVQLFL SNFSLDGQPQ ALSKETVGAS KYQQASVALL GSDCQGEQNW 
LLSFDKALKP GLMTFELGVP FELNHGNPLL AETPLNQSDM FWTWQQGHKF LRIDLAKTLL 
TEPAVGKQTG WQFHLGSVAC QSASVMRSPT QACKQPNRAK FSLDYQGQHQ LNLDLAVLLA 
PLLDDPQLSQ QSCMSDSASK TCQLLFSRLG LGQALPFETQ QLSINAIEPV APLWWFN